RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TCEAL8Q8IYN2 117 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ELMOD1Q8N336 334 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 MYCBPAPQ8TBZ2 947 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 SPATA18Q8TC71 538 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 SECISBP2LQ93073 1101 aaKnown RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 PCED1BQ96HM7 432 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 TNIP3Q96KP6 325 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 KREMEN1Q96MU8 473 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 CORO1BQ9BR76 489 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 B3GNT5Q9BYG0 378 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF518BQ9C0D4 1074 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ANKZF1Q9H8Y5 726 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 LUC7LQ9NQ29 371 aaKnown RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 FAM207AQ9NSI2 230 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 AJAP1Q9UKB5 411 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 MAGED2Q9UNF1 606 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF638Q14966 1978 aaKnown RBP10.44□□□□□ -0.74
PSEN1-213ENST00000555386 NOTCH4Q99466 2003 aa10.44□□□□□ -0.74
PSEN1-213ENST00000555386 LRRC53A6NM62 1247 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 MBTPS2O43462 519 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 XYLBO75191 536 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 HAPLN1P10915 354 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 GRIK1P39086 918 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 KIF11P52732 1056 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 EPHB3P54753 998 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 MFAP3P55082 362 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 YWHAEP62258 255 aaKnown RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 INCA1Q0VD86 236 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 KCNMA1Q12791 1236 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 SMAD4Q13485 552 aaKnown RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 LEXMQ3ZCV2 418 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ATAT1Q5SQI0 421 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 CACNA2D4Q7Z3S7 1137 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 RNF10Q8N5U6 811 aaKnown RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 SMRP1Q8NCR6 262 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ST13P5Q8NFI4 369 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 SPPL2BQ8TCT7 592 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 SLC2A14Q8TDB8 520 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 WHAMMQ8TF30 809 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF707Q96C28 371 aaPredicted RBP10.43□□□□□ -0.74
PSEN1-213ENST00000555386 TMEM176AQ96HP8 235 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 PKMYT1Q99640 499 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 S1PR5Q9H228 398 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ADAM7Q9H2U9 754 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 SIX2Q9NPC8 291 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ZDHHC7Q9NXF8 308 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 ARHGAP20Q9P2F6 1191 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 APEX2Q9UBZ4 518 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 JRKLQ9Y4A0 524 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 PCDHA13Q9Y5I0 950 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 GREB1Q4ZG55 1949 aa10.43□□□□□ -0.74
PSEN1-213ENST00000555386 FAM170AA1A519 330 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 TARSL2A2RTX5 802 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 GTPBP10A4D1E9 387 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 AKR1B10O60218 316 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 AP1G2O75843 785 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 SERPING1P05155 500 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 FAM163BP0C2L3 166 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 MYL4P12829 197 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ATF6P18850 670 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 TUFMP49411 452 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 RAD23BP54727 409 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ITIH3Q06033 890 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 PLD1Q13393 1074 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 MTMR3Q13615 1198 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 CBX2Q14781 532 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 MAPRE1Q15691 268 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 AAK1Q2M2I8 961 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ASTE1Q2TB18 679 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 PPP1R26Q5T8A7 1209 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 WDR93Q6P2C0 686 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 GET4Q7L5D6 327 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 GPR149Q86SP6 731 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 FAM35AQ86V20 835 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 SLC4A11Q8NBS3 891 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 RBBP8NLQ8NC74 664 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 C2orf15Q8WU43 125 aaKnown RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 HDAC7Q8WUI4 952 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 RUBCNQ92622 972 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 CYFIP2Q96F07 1278 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ZNF512Q96ME7 567 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-213ENST00000555386 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 ALS2CR12Q96Q35 445 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 UBXN6Q9BZV1 441 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 DNAI2Q9GZS0 605 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 LACRTQ9GZZ8 138 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 POMKQ9H5K3 350 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 NLRC4Q9NPP4 1024 aa10.42□□□□□ -0.74
PSEN1-213ENST00000555386 PLCB1Q9NQ66 1216 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms