RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 OVCA2Q8WZ82 227 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 FAM81BQ96LP2 452 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 SMOQ99835 787 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 DUSP16Q9BY84 665 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 NACA2Q9H009 215 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
SRP54-206ENST00000555317 TBC1D17Q9HA65 648 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 TMEM30AQ9NV96 361 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 COMMD8Q9NX08 183 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 PATJQ8NI35 1801 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 TICRRQ7Z2Z1 1910 aa12.8□□□□□ -0.36
SRP54-206ENST00000555317 ZNF840PA6NDX5 716 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 CHADO15335 359 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 KRT5P13647 590 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 HDCP19113 662 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 EEF1GP26641 437 aaKnown RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 ZNF268Q14587 947 aaPredicted RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 CAVIN1Q6NZI2 390 aaKnown RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 ENOSF1Q7L5Y1 443 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 ARL14EPQ8N8R7 260 aaPredicted RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 USP13Q92995 863 aaPredicted RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 MED15Q96RN5 788 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 PNPLA8Q9NP80 782 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 UBE2TQ9NPD8 197 aaPredicted RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
SRP54-206ENST00000555317 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
SRP54-206ENST00000555317 MIA3Q5JRA6 1907 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 GTPBP10A4D1E9 387 aaKnown RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 C2orf78A6NCI8 922 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 BEST1O76090 585 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 PAEPP09466 180 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 VDRP11473 427 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 ACO1P21399 889 aaKnown RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 CLCN5P51795 746 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 BCAT1P54687 386 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 MFAP3P55082 362 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 FCHO2Q0JRZ9 810 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 ARHGAP17Q68EM7 881 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 TRIM65Q6PJ69 517 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 IRF2BP1Q8IU81 584 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 ARHGEF19Q8IW93 802 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 LMO3Q8TAP4 145 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 PRRX2Q99811 253 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 TLR8Q9NR97 1041 aaKnown RBP12.78□□□□□ -0.36
SRP54-206ENST00000555317 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 GMIPQ9P107 970 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 PIAS3Q9Y6X2 628 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 CACNA1HO95180 2353 aa12.78□□□□□ -0.36
SRP54-206ENST00000555317 KMT2EQ8IZD2 1858 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 TNFRSF10BO14763 440 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
SRP54-206ENST00000555317 AOC1P19801 751 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 USP8P40818 1118 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 MYL5Q02045 173 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 TYRO3Q06418 890 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
SRP54-206ENST00000555317 UBXN2BQ14CS0 331 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 STILQ15468 1287 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 HECTD3Q5T447 861 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRP54-206ENST00000555317 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 ZMIZ2Q8NF64 920 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 KAT5Q92993 513 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 ZFYVE19Q96K21 471 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 TRPV5Q9NQA5 729 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
SRP54-206ENST00000555317 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 APEX2Q9UBZ4 518 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
SRP54-206ENST00000555317 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 ARHGAP26Q9UNA1 814 aa12.77□□□□□ -0.37
SRP54-206ENST00000555317 NCANO14594 1321 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms