RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 SIT1Q9Y3P8 196 aa13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC6B-205ENST00000555269 ATP8B3O60423 1300 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 PMM2O15305 246 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 CHADO15335 359 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 CALCAP01258 141 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 SOX9P48436 509 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 SLC5A3P53794 718 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 MARSP56192 900 aaKnown RBP13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 PRKCQQ04759 706 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 TCF15Q12870 199 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 FBXO32Q969P5 355 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 OBP2AQ9NY56 170 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
TRAPPC6B-205ENST00000555269 TRAV19A0A0A6YYK7 116 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 OTOL1A6NHN0 477 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SOBPA7XYQ1 873 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 HHLA1C9JL84 531 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 H0Y858 1186 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 FGFR1OPO95684 399 aaKnown RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CKMP06732 381 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 USP17L7P0C7H9 530 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 FZD5Q13467 585 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 UBR7Q8N806 425 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CSGALNACT1Q8TDX6 532 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CNOT6LQ96LI5 555 aaKnown RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TRPV5Q9NQA5 729 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 THG1LQ9NWX6 298 aaKnown RBP13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 GMIPQ9P107 970 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 DLGAP2Q9P1A6 1054 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ZNF318Q5VUA4 2279 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 P4HA2O15460 535 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ARSAP15289 507 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 KPNA1P52294 538 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 APBA1Q02410 837 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CETN1Q12798 172 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ZNF268Q14587 947 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TPD52L1Q16890 204 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 DTWD2Q8NBA8 298 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 PJA1Q8NG27 643 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 NT5C1BQ96P26 610 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 INTS2Q9H0H0 1204 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 LTB4R2Q9NPC1 389 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 EHD2Q9NZN4 543 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 NDRG2Q9UN36 371 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 PCDHB4Q9Y5E5 795 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 PIAS3Q9Y6X2 628 aa13.13□□□□□ -0.31
TRAPPC6B-205ENST00000555269 GOLGA6L22H0YM25 854 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TULP2O00295 520 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SCAMP3O14828 347 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TBX18O95935 607 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CD19P15391 556 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 SLC9A1P19634 815 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ERCC5P28715 1186 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 PPP3CCP48454 512 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 GJB7Q6PEY0 223 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TXNDC11Q6PKC3 985 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 UBA3Q8TBC4 463 aa13.12□□□□□ -0.31
TRAPPC6B-205ENST00000555269 TFAP2BQ92481 460 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms