RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 TFAP2BQ92481 460 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 MRPS31Q92665 395 aaKnown RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 RSPRY1Q96DX4 576 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 FAM81BQ96LP2 452 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 COMMD8Q9NX08 183 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ZMYM5Q9UJ78 669 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 DUSP12Q9UNI6 340 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 TRIOO75962 3097 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 FAM92AA1XBS5 289 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 O00370 1275 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 PES1O00541 588 aaKnown RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 CALCAP01258 141 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 CD19P15391 556 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 YWHAQP27348 245 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 VIPR2P41587 438 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 MFAP3P55082 362 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 TAF10Q12962 218 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 TXNDC8Q6A555 127 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 GPRIN1Q7Z2K8 1008 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 TTC30AQ86WT1 665 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ARID3BQ8IVW6 561 aaPredicted RBP15.03■□□□□ -0
SHMT2-217ENST00000555116 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ANKRD52Q8NB46 1076 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ZSWIM1Q9BR11 485 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ZFP14Q9HCL3 533 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 PNPLA8Q9NP80 782 aa15.03■□□□□ -0
SHMT2-217ENST00000555116 ZNF840PA6NDX5 716 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 SMTNL1A8MU46 457 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 BECN2A8MW95 431 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 ATP1A3P13637 1013 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 IFRD2Q12894 506 aaPredicted RBP15.02■□□□□ -0
SHMT2-217ENST00000555116 ARHGAP44Q17R89 818 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 GOLGA7BQ2TAP0 167 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 CMTM8Q8IZV2 173 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 SHC3Q92529 594 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 C11orf16Q9NQ32 467 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 DNAJC12Q9UKB3 198 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
SHMT2-217ENST00000555116 PRAMEF12O95522 483 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 TPM2P07951 284 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SRFP11831 508 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 KRT5P13647 590 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 CDK11BP21127 795 aaKnown RBP15.01□□□□□ -0.01
SHMT2-217ENST00000555116 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SIGLEC14Q08ET2 396 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 PKDCCQ504Y2 493 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 LCLAT1Q6UWP7 414 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 VITQ6UXI7 678 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 TRIM67Q6ZTA4 783 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 ANKRD20A12PQ8NF67 263 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 FBXO32Q969P5 355 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 LSM14BQ9BX40 385 aaKnown RBP15.01□□□□□ -0.01
SHMT2-217ENST00000555116 UBXN6Q9BZV1 441 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 TICRRQ7Z2Z1 1910 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 COL4A2P08572 1712 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 LGALS16A8MUM7 142 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 HEPACAM2A8MVW5 462 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 ADCY5O95622 1261 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 PPP3CCP48454 512 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 CNGA2Q16280 664 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 KLHDC7AQ5VTJ3 777 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SMYD5Q6GMV2 418 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 OVCA2Q8WZ82 227 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 E2F7Q96AV8 911 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 ASIC4Q96FT7 647 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 LRRC3BQ96PB8 259 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SLITRK1Q96PX8 696 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SLC22A12Q96S37 553 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SMG9Q9H0W8 520 aaKnown RBP15.01□□□□□ -0.01
SHMT2-217ENST00000555116 CBX8Q9HC52 389 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 SLC2A4RGQ9NR83 387 aa15.01□□□□□ -0.01
SHMT2-217ENST00000555116 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHMT2-217ENST00000555116 C2orf78A6NCI8 922 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 TULP2O00295 520 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 ZDHHC11BP0C7U3 371 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 KIF11P52732 1056 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 BCAT1P54687 386 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 GPC5P78333 572 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 PDE4CQ08493 712 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 PIGZQ86VD9 579 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 ZSCAN30Q86W11 494 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 PDZD8Q8NEN9 1154 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 UBA3Q8TBC4 463 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
SHMT2-217ENST00000555116 NAA15Q9BXJ9 866 aaKnown RBP15□□□□□ -0.01
SHMT2-217ENST00000555116 FBXO44Q9H4M3 255 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 PLCB1Q9NQ66 1216 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 OBP2AQ9NY56 170 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 GMIPQ9P107 970 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 SIK3Q9Y2K2 1263 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 FHOD1Q9Y613 1164 aa15□□□□□ -0.01
SHMT2-217ENST00000555116 TRAV19A0A0A6YYK7 116 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 FOXN3O00409 490 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 CAVIN2O95810 425 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 PFKLP17858 780 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 CLCN1P35523 988 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms