RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PNPLA4P41247 253 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 EIF3BP55884 814 aaKnown RBP18.31■□□□□ 0.52
SHOX-204ENST00000554971 DSG1Q02413 1049 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 GCNT1Q02742 428 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 TRPC3Q13507 836 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 USP41Q3LFD5 358 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 APOBEC3GQ9HC16 384 aaKnown RBP18.31■□□□□ 0.52
SHOX-204ENST00000554971 TMBIM4Q9HC24 238 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 GDAP2Q9NXN4 497 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 GTF3C4Q9UKN8 822 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 PLAAQ9Y263 795 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 PLXNA3P51805 1871 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 STAU1O95793 577 aaKnown RBP18.31■□□□□ 0.52
SHOX-204ENST00000554971 KRT14P02533 472 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 PIK3CAP42336 1068 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 CDR2Q01850 454 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 WDR72Q3MJ13 1102 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 SV2CQ496J9 727 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
SHOX-204ENST00000554971 CDX2Q99626 313 aaPredicted RBP18.31■□□□□ 0.52
SHOX-204ENST00000554971 ZSWIM1Q9BR11 485 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 ERP44Q9BS26 406 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 MTMR10Q9NXD2 777 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 SNX9Q9Y5X1 595 aa18.31■□□□□ 0.52
SHOX-204ENST00000554971 C2CD2LO14523 706 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 TRAPPC3O43617 180 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 MYZAPP0CAP1 466 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 CHRNB2P17787 502 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 CTNNA2P26232 953 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 GNGT1P63211 74 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 DR1Q01658 176 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 ELAVL2Q12926 359 aaKnown RBP18.3■□□□□ 0.52
SHOX-204ENST00000554971 MYO1EQ12965 1108 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 ZNF699Q32M78 642 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 AGBL2Q5U5Z8 902 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 DCAF12L1Q5VU92 463 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 PLPP4Q5VZY2 271 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 PRSS55Q6UWB4 352 aaPredicted RBP18.3■□□□□ 0.52
SHOX-204ENST00000554971 RSPO2Q6UXX9 243 aaPredicted RBP18.3■□□□□ 0.52
SHOX-204ENST00000554971 TMC7Q7Z402 723 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 CEP57Q86XR8 500 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 ZNF677Q86XU0 584 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 SPATS2Q86XZ4 545 aaKnown RBP18.3■□□□□ 0.52
SHOX-204ENST00000554971 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 RRP15Q9Y3B9 282 aaKnown RBP18.3■□□□□ 0.52
SHOX-204ENST00000554971 IRAK3Q9Y616 596 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 MTCH2Q9Y6C9 303 aa18.3■□□□□ 0.52
SHOX-204ENST00000554971 CYB561D2O14569 222 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 SYN3O14994 580 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 TTI1O43156 1089 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 ATICP31939 592 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 GLUD2P49448 558 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 BPIFB4P59827 614 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 MRPL58Q14197 206 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 TRADDQ15628 312 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 SOWAHAQ2M3V2 549 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 VARS2Q5ST30 1063 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 DUPD1Q68J44 220 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 ADGRD2Q7Z7M1 963 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 CROCCP2Q86T23 111 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 NOP9Q86U38 636 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 PPM1KQ8N3J5 372 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 MYLIPQ8WY64 445 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 PCDHB8Q9UN66 801 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 POLIQ9UNA4 740 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 NFS1Q9Y697 457 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 MTCL1Q9Y4B5 1905 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 DAPK3O43293 454 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 PPFIA2O75334 1257 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 CYP11A1P05108 521 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 CYP11B1P15538 503 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 POU3F3P20264 500 aaPredicted RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 NR1D1P20393 614 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 PEX5P50542 639 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 PDE6CP51160 858 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 NOP14P78316 857 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 SGSM1Q2NKQ1 1148 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 CEP85LQ5SZL2 805 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 SEL1L2Q5TEA6 688 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 WSCD1Q658N2 575 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 DSTYKQ6XUX3 929 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 MRPL43Q8N983 215 aaKnown RBP18.29■□□□□ 0.52
SHOX-204ENST00000554971 KBTBD7Q8WVZ9 684 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 ZBTB9Q96C00 473 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 TRIM11Q96F44 468 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 LMAN2LQ9H0V9 348 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
SHOX-204ENST00000554971 CYP26A1O43174 497 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 PHF2O75151 1096 aa18.28■□□□□ 0.52
SHOX-204ENST00000554971 RPL17P18621 184 aaKnown RBP18.28■□□□□ 0.52
SHOX-204ENST00000554971 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
SHOX-204ENST00000554971 USP8P40818 1118 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms