RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 DNAJB7Q7Z6W7 309 aaPredicted RBP17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 GPR149Q86SP6 731 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 TMEM110Q86TL2 294 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 TMTC1Q8IUR5 882 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 PASD1Q8IV76 773 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 C1orf131Q8NDD1 294 aaKnown RBP17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 SLC30A5Q8TAD4 765 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 OLIG1Q8TAK6 271 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 GIPC2Q8TF65 315 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 MSLNLQ96KJ4 702 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 CCDC42Q96M95 316 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 PCDHB18PQ96TA0 734 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 AVENQ9NQS1 362 aaPredicted RBP17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 CNGB3Q9NQW8 809 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 SEPT11Q9NVA2 429 aaKnown RBP17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 USP3Q9Y6I4 520 aa17.33■□□□□ 0.37
SPTLC2-203ENST00000554901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 TULP2O00295 520 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 CCL16O15467 120 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 SART1O43290 800 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 HMGA1P17096 107 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 SSTR3P32745 418 aaPredicted RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 EIF4A3P38919 411 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 NSFP46459 744 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 PPP3CCP48454 512 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 EPHA5P54756 1037 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 CCDC186Q7Z3E2 898 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 CCDC170Q8IYT3 715 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 IPO4Q8TEX9 1081 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 OVCA2Q8WZ82 227 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 SMG7Q92540 1137 aaKnown RBP17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 PPP1R13BQ96KQ4 1090 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 DEF6Q9H4E7 631 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 ADAMTS1Q9UHI8 967 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 CYTH4Q9UIA0 394 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 NCANO14594 1321 aa17.32■□□□□ 0.36
SPTLC2-203ENST00000554901 DDX3XO00571 662 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 FBXO21O94952 628 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PLEKP08567 350 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 MMP8P22894 467 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 YWHAQP27348 245 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 GABRB2P47870 512 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ASTE1Q2TB18 679 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PABPC1LQ4VXU2 614 aaKnown RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 RARS2Q5T160 578 aaKnown RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 NAA35Q5VZE5 725 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PM20D1Q6GTS8 502 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 TMC5Q6UXY8 1006 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ERICH1Q86X53 443 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PHF13Q86YI8 300 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ZDHHC17Q8IUH5 632 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SIX6OS1Q8N1H7 587 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PDZD8Q8NEN9 1154 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 VCPIP1Q96JH7 1222 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SLITRK1Q96PX8 696 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CHP1Q99653 195 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 S1PR5Q9H228 398 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PIDD1Q9HB75 910 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ASAH2Q9NR71 780 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ST7Q9NRC1 585 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 COG5Q9UP83 839 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SCML2Q9UQR0 700 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 PATJQ8NI35 1801 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 MYH10P35580 1976 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 RGS7P49802 495 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 TKTL1P51854 596 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 DLX2Q07687 328 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CCDC173Q0VFZ6 552 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CCDC85BQ15834 202 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CYP4A22Q5TCH4 519 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 ACAD10Q6JQN1 1059 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 EP400NLQ6ZTU2 488 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 GPRIN1Q7Z2K8 1008 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 C12orf76Q8N812 135 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SMRP1Q8NCR6 262 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CPA5Q8WXQ8 436 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 IRGQQ8WZA9 623 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 HLA-CQ95604 372 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 RIPOR3Q96MK2 946 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 CPXM1Q96SM3 734 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 BAG1Q99933 345 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 SYNCQ9H7C4 482 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 UBE2ZQ9H832 354 aaPredicted RBP17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 STRIP2Q9ULQ0 834 aa17.31■□□□□ 0.36
SPTLC2-203ENST00000554901 A0A087X0T9 212 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ZNF197O14709 1029 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 AKR1B10O60218 316 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 RTN2O75298 545 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ZBED1O96006 694 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 FAM228BP0C875 321 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms