RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 RAB41Q5JT25 222 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 ATAT1Q5SQI0 421 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 CYP4A22Q5TCH4 519 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 IRF2BP2Q7Z5L9 587 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 GPR149Q86SP6 731 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 TTC30AQ86WT1 665 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 ZDHHC17Q8IUH5 632 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 SIX6OS1Q8N1H7 587 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 ARHGAP18Q8N392 663 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 STKLD1Q8NE28 680 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 SLC35F5Q8WV83 523 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 CPLX3Q8WVH0 158 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 PPM1EQ8WY54 764 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 TFAP2BQ92481 460 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 DDX1Q92499 740 aaKnown RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 SMG7Q92540 1137 aaKnown RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 VCPIP1Q96JH7 1222 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 PANX2Q96RD6 677 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 CDK5RAP1Q96SZ6 601 aaKnown RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 SMOQ99835 787 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 ADAM7Q9H2U9 754 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 LRRC4Q9HBW1 653 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 CNGB3Q9NQW8 809 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 TMEM51Q9NW97 253 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 IL37Q9NZH6 218 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 NOCTQ9UK39 431 aaKnown RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 STRIP2Q9ULQ0 834 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
LINC01397-201ENST00000554808 ZFP37Q9Y6Q3 630 aaPredicted RBP8.5□□□□□ -1.05
LINC01397-201ENST00000554808 TICRRQ7Z2Z1 1910 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SLC38A8A6NNN8 435 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CCL16O15467 120 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 LINC01565O15544 149 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CYP1A1P04798 512 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CALB1P05937 261 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 MMEP08473 750 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SPATA31D3P0C874 917 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 PNMA6AP0CW24 399 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 LTBRP36941 435 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SCNN1AP37088 669 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 RPL34P49207 117 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 KIF11P52732 1056 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SLC5A3P53794 718 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 GSCP56915 257 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 FMO1Q01740 532 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CENPCQ03188 943 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ARID5AQ03989 594 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 PDE4CQ08493 712 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 MAPK8IP2Q13387 824 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 LEXMQ3ZCV2 418 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ARHGAP15Q53QZ3 475 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 RARS2Q5T160 578 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SYCE2Q6PIF2 218 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 EP400NLQ6ZTU2 488 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SPATA31D4Q6ZUB0 917 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 PDZD4Q76G19 769 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CCDC186Q7Z3E2 898 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 DNAJB7Q7Z6W7 309 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 TADA2BQ86TJ2 420 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 PIGZQ86VD9 579 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ZNF276Q8N554 614 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 TTC9BQ8N6N2 239 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 C1orf131Q8NDD1 294 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ZMIZ2Q8NF64 920 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 IRGQQ8WZA9 623 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 GOLGA1Q92805 767 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 SECISBP2LQ93073 1101 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 TRIM11Q96F44 468 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 ASB2Q96Q27 587 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 KCNK16Q96T55 309 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 UHRF1Q96T88 793 aaPredicted RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 AGPAT1Q99943 283 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CRISPLD1Q9H336 500 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 DEF6Q9H4E7 631 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 HAUS4Q9H6D7 363 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 WDR6Q9NNW5 1121 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 LUC7LQ9NQ29 371 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 TLR8Q9NR97 1041 aaKnown RBP8.49□□□□□ -1.05
LINC01397-201ENST00000554808 CLEC1BQ9P126 229 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 WDR35Q9P2L0 1181 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 USP3Q9Y6I4 520 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 MYOFQ9NZM1 2061 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
LINC01397-201ENST00000554808 HHLA1C9JL84 531 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 RFPL2O75678 378 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 IPO7O95373 1038 aaKnown RBP8.48□□□□□ -1.05
LINC01397-201ENST00000554808 ZBED1O96006 694 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 RHOP08100 348 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 GLI1P08151 1106 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 UNGP13051 313 aaPredicted RBP8.48□□□□□ -1.05
LINC01397-201ENST00000554808 DESP17661 470 aa8.48□□□□□ -1.05
LINC01397-201ENST00000554808 YWHAQP27348 245 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms