RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LAYNQ6UX15 382 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ZDHHC24Q6UX98 284 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 RD3Q7Z3Z2 195 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 MYLK4Q86YV6 388 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 TXLNBQ8N3L3 684 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ANKRD42Q8N9B4 389 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 BOLLQ8N9W6 283 aaKnown RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ATP11CQ8NB49 1132 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 RAPGEF4Q8WZA2 1011 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 SPSB4Q96A44 273 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 C18orf8Q96DM3 657 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 PBKQ96KB5 322 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 NELL2Q99435 816 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ALG8Q9BVK2 526 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 BRIP1Q9BX63 1249 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CXorf36Q9H7Y0 433 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 SEMA4GQ9NTN9 838 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 SLC17A6Q9P2U8 582 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 NDRG4Q9ULP0 352 aaKnown RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 MRPS17Q9Y2R5 130 aaKnown RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CEP83Q9Y592 693 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 ENTPD2Q9Y5L3 495 aa3.74□□□□□ -1.81
SCFD1-213ENST00000554776 MORC2Q9Y6X9 1032 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 POLR2AP24928 1970 aaKnown RBP3.74□□□□□ -1.81
SCFD1-213ENST00000554776 CCDC189A1A4V9 331 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 PPM1DO15297 605 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 C1QL1O75973 258 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 MT-ND5P03915 603 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 FGFR2P21802 821 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 KCNA3P22001 575 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 FBLP22087 321 aaKnown RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 DGKEP52429 567 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 ELLP55199 621 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 SP2Q02086 613 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 BTKQ06187 659 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 MPEG1Q2M385 716 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 SLC35G1Q2M3R5 365 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 MGAT5BQ3V5L5 792 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 MAVSQ7Z434 540 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 GRASPQ7Z6J2 395 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF575Q86XF7 245 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 SYTL1Q8IYJ3 562 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 ATG4AQ8WYN0 398 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 RFKQ969G6 155 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF566Q969W8 418 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 FKBP10Q96AY3 582 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 IQCDQ96DY2 449 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 LRRC46Q96FV0 321 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF764Q96H86 408 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 UROC1Q96N76 676 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 TIMP4Q99727 224 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 KLK15Q9H2R5 256 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 XPNPEP3Q9NQH7 507 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 SERTAD3Q9UJW9 196 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 MAGED2Q9UNF1 606 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 PCDHGB3Q9Y5G1 929 aa3.73□□□□□ -1.81
SCFD1-213ENST00000554776 COL11A2P13942 1736 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-213ENST00000554776 A0A087WV62 115 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 A0A1W2PPC4 97 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 LINC00473A8K010 186 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 FOXN3O00409 490 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 CCP110O43303 1012 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 RASSF9O75901 435 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 URI1O94763 535 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 IGLV2-14P01704 120 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 ERBB2P04626 1255 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 TXNP10599 105 aaKnown RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 ITPKBP27987 946 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 TECP42680 631 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 TNFAIP2Q03169 654 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 KRT17Q04695 432 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 STARD3Q14849 445 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 DGKKQ5KSL6 1271 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 RNF44Q7L0R7 432 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 DTX2Q86UW9 622 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 MYCT1Q8N699 235 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 ZNF527Q8NB42 609 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 MYRIPQ8NFW9 859 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 BPIFB1Q8TDL5 484 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 NTN5Q8WTR8 489 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 NELL1Q92832 810 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 PPP1R9BQ96SB3 815 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 CHST8Q9H2A9 424 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 EHD3Q9NZN3 535 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 DNMT3BQ9UBC3 853 aaKnown RBP3.72□□□□□ -1.81
SCFD1-213ENST00000554776 MYO1AQ9UBC5 1043 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 DKK3Q9UBP4 350 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 HDAC9Q9UKV0 1011 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 MAN2B2Q9Y2E5 1009 aa3.72□□□□□ -1.81
SCFD1-213ENST00000554776 SPATA31A6Q5VVP1 1343 aa3.71□□□□□ -1.81
SCFD1-213ENST00000554776 LOC102723971A0A1B0GUV8 181 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 RAB27BO00194 218 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 TLR5O60602 858 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 PROP1O75360 226 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 NXPH3O95157 252 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 NDST3O95803 873 aa3.71□□□□□ -1.82
SCFD1-213ENST00000554776 ANXA2P07355 339 aaKnown RBP3.71□□□□□ -1.82
SCFD1-213ENST00000554776 NR2F6P10588 404 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms