RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 WNT9AO14904 365 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 MAGEB2O15479 319 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 EFCAB14O75071 495 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 RHOBTB3O94955 611 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 SMC2O95347 1197 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 RPN1P04843 607 aaKnown RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 KRT18P05783 430 aaKnown RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 IDEP14735 1019 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ARL2P36404 184 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 CDK7P50613 346 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 CLCN3P51790 818 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 POLGP54098 1239 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ITGA7Q13683 1181 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 KCNB1Q14721 858 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ZSCAN23Q3MJ62 389 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 EFCAB12Q6NXP0 572 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 NFRKBQ6P4R8 1299 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 MTHFD1LQ6UB35 978 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 SFR1Q86XK3 245 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 CCDC65Q8IXS2 484 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 KIAA0319LQ8IZA0 1049 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 LRRC71Q8N4P6 559 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 C7orf31Q8N865 590 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 MCPH1Q8NEM0 835 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ZSCAN18Q8TBC5 510 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 DIS3LQ8TF46 1054 aaKnown RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 SMARCE1Q969G3 411 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 GLT1D1Q96MS3 346 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 GSDMAQ96QA5 445 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 FIZ1Q96SL8 496 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 FUCA2Q9BTY2 467 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 TIPINQ9BVW5 301 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 JAM3Q9BX67 310 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 FGFBP2Q9BYJ0 223 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 POLR3FQ9H1D9 316 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-212ENST00000554486 PANK4Q9NVE7 773 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 ODF2LQ9ULJ1 636 aa6.91□□□□□ -1.3
SCFD1-212ENST00000554486 A0A0U1RQG5 324 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SMIM35A0A1B0GVV1 85 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SYCE3A1L190 88 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 H7BY64 318 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 TBCAO75347 108 aaKnown RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 CKMP06732 381 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 DBHP09172 617 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 GNAT1P11488 350 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 COL6A1P12109 1028 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 GLRA2P23416 452 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 PEX3P56589 373 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 GUCY1A3Q02108 690 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 MORC3Q14149 939 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF460Q14592 562 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 HERC4Q5GLZ8 1057 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 FAM47CQ5HY64 1035 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 FAM102BQ5T8I3 360 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 ISM2Q6H9L7 571 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 EXOC8Q8IYI6 725 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 METTL13Q8N6R0 699 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 KIAA0895Q8NCT3 520 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 TCP11Q8WWU5 503 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 PRPF31Q8WWY3 499 aaKnown RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 KIFAP3Q92845 792 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SENP6Q9GZR1 1112 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 ZHX3Q9H4I2 956 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF552Q9H707 407 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 IPPKQ9H8X2 491 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 PARVGQ9HBI0 331 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 STARD7Q9NQZ5 370 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 CLDND1Q9NY35 253 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 TBC1D7Q9P0N9 293 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SUCLA2Q9P2R7 463 aaPredicted RBP6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SEL1LQ9UBV2 794 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 GDAQ9Y2T3 454 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
SCFD1-212ENST00000554486 SIP14410 1827 aa6.9□□□□□ -1.31
SCFD1-212ENST00000554486 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TCAF2A6NFQ2 919 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 B4GALT4O60513 344 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 LETM1O95202 739 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 VTNP04004 478 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 SOD2P04179 222 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 NTRK1P04629 796 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 C1QTNF9P0C862 333 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 MYBP10242 640 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 CYP2C9P11712 490 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 GAP43P17677 238 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 EN2P19622 333 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 GRK2P25098 689 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 TMOD1P28289 359 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 NMT1P30419 496 aaKnown RBP6.89□□□□□ -1.31
SCFD1-212ENST00000554486 GRK3P35626 688 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 NAMPTP43490 491 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 NPTX2P47972 431 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 DNM2P50570 870 aa6.89□□□□□ -1.31
SCFD1-212ENST00000554486 CASP5P51878 434 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms