RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 BCAT1P54687 386 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 COL10A1Q03692 680 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 HDAC1Q13547 482 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-211ENST00000554437 FAM209BQ5JX69 171 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SLC9A4Q6AI14 798 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 BEND5Q7L4P6 421 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 GRASPQ7Z6J2 395 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SRLQ86TD4 932 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 LRRC71Q8N4P6 559 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SIMC1Q8NDZ2 872 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 ZC3H10Q96K80 434 aaKnown RBP6.07□□□□□ -1.44
SCFD1-211ENST00000554437 HAPLN3Q96S86 360 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 COLEC11Q9BWP8 271 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 FAM83DQ9H4H8 585 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SYNPO2LQ9H987 977 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 GJB4Q9NTQ9 266 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SERTAD4Q9NUC0 356 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 DKK4Q9UBT3 224 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 ZNHIT2Q9UHR6 403 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 USP22Q9UPT9 525 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 SH2B3Q9UQQ2 575 aa6.07□□□□□ -1.44
SCFD1-211ENST00000554437 CD3EAPO15446 510 aaKnown RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 NCK2O43639 380 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 VNN1O95497 513 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 HGFP14210 728 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 KCNAB1Q14722 419 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 FAM153CQ494X1 144 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 AKNAD1Q5T1N1 836 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 TSTD2Q5T7W7 516 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 CAND1Q86VP6 1230 aaKnown RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 SOCS4Q8WXH5 440 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 ZBTB45Q96K62 511 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 ELAC2Q9BQ52 826 aaKnown RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 DPCDQ9BVM2 203 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 HEYLQ9NQ87 328 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-211ENST00000554437 IL17RBQ9NRM6 502 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 SLC17A6Q9P2U8 582 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 MYO1AQ9UBC5 1043 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 PADI4Q9UM07 663 aa6.06□□□□□ -1.44
SCFD1-211ENST00000554437 A0A1W2PPC4 97 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 ZAR1LA6NP61 321 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 AREL1O15033 823 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 NUDT3O95989 172 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 FAM163BP0C2L3 166 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 JUPP14923 745 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 BMP5P22003 454 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 EPHA3P29320 983 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 UQCRC1P31930 480 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CYP2C18P33260 490 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 MTHFSP49914 203 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CCT8P50990 548 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CACNA2D1P54289 1103 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 PMS2P11Q13670 270 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CERS3Q8IU89 383 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 TXLNBQ8N3L3 684 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 OR2C3Q8N628 320 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 VGLL2Q8N8G2 317 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CCDC150Q8NCX0 1101 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 RIOX1Q9H6W3 641 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 AS3MTQ9HBK9 375 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
SCFD1-211ENST00000554437 FNIP2Q9P278 1114 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 INSL6Q9Y581 213 aa6.05□□□□□ -1.44
SCFD1-211ENST00000554437 CLCA1A8K7I4 914 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 GCOM1H8Y6P7 765 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-211ENST00000554437 PSMD9O00233 223 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 QSOX1O00391 747 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 HARSP12081 509 aaKnown RBP6.04□□□□□ -1.44
SCFD1-211ENST00000554437 PCSK6P29122 969 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 PGDP52209 483 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 TPTEP56180 551 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 UBE4AQ14139 1066 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 STRIP1Q5VSL9 837 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 IZUMO3Q5VZ72 239 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 CATSPERGQ6ZRH7 1159 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 PARS2Q7L3T8 475 aaKnown RBP6.04□□□□□ -1.44
SCFD1-211ENST00000554437 KRT28Q7Z3Y7 464 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 RASAL3Q86YV0 1011 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 ACRBPQ8NEB7 543 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 BRI3BPQ8WY22 251 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 ZNF668Q96K58 619 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-211ENST00000554437 MAGEB5Q9BZ81 275 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 INO80BQ9C086 356 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-211ENST00000554437 ZNF700Q9H0M5 742 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 CERS4Q9HA82 394 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 CPNE5Q9HCH3 593 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 NLRC4Q9NPP4 1024 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 ASB6Q9NWX5 421 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 DLL3Q9NYJ7 618 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 HPSEQ9Y251 543 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 CEP83Q9Y592 693 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 ENTPD2Q9Y5L3 495 aa6.04□□□□□ -1.44
SCFD1-211ENST00000554437 FER1L4A9Z1Z3 1794 aa6.03□□□□□ -1.44
SCFD1-211ENST00000554437 FGF18O76093 207 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms