RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CDH7Q9ULB5 785 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 SRPK3Q9UPE1 567 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 ZFP37Q9Y6Q3 630 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 DOCK5Q9H7D0 1870 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 MAN2B1O00754 1011 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 CAPN9O14815 690 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 CAVIN2O95810 425 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 TOP1P11387 765 aaKnown RBP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 INSRRP14616 1297 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 HOXA13P31271 388 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 PXNP49023 591 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 PPARAQ07869 468 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 SRSF1Q07955 248 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 CLLU1OSQ5K130 101 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 B3GNT8Q7Z7M8 397 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 PALB2Q86YC2 1186 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 ERC1Q8IUD2 1116 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 SPEM1Q8N4L4 309 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 ADCY4Q8NFM4 1077 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 FAM3CQ92520 227 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 ZNF707Q96C28 371 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-226ENST00000554350 SPATA25Q9BR10 227 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 NACAP1Q9BZK3 213 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 NT5C3AQ9H0P0 336 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 DCTPP1Q9H773 170 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 WHRNQ9P202 907 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 EXOC6BQ9Y2D4 811 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 INPP5FQ9Y2H2 1132 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 PCDHGA5Q9Y5G8 931 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 SPAG17Q6Q759 2223 aa6.38□□□□□ -1.39
ATXN3-226ENST00000554350 KDM3AQ9Y4C1 1321 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 LNP1A1A4G5 178 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 URODP06132 367 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 PDHBP11177 359 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 DEKP35659 375 aaKnown RBP6.37□□□□□ -1.39
ATXN3-226ENST00000554350 SOX9P48436 509 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 NTHL1P78549 312 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 FAM189BP81408 668 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 ZNF543Q08ER8 600 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 PLCB4Q15147 1175 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 LONRF3Q496Y0 759 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 RRP12Q5JTH9 1297 aaKnown RBP6.37□□□□□ -1.39
ATXN3-226ENST00000554350 GRASPQ7Z6J2 395 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-226ENST00000554350 WDR5BQ86VZ2 330 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 ECHDC2Q86YB7 292 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 NME8Q8N427 588 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-226ENST00000554350 PIP4K2CQ8TBX8 421 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 GAB3Q8WWW8 586 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 KLHL6Q8WZ60 621 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 FGF13Q92913 245 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 SNX21Q969T3 373 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 TSPAN17Q96FV3 270 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 NOX5Q96PH1 765 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 BDH2Q9BUT1 245 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 MAF1Q9H063 256 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 NAPBQ9H115 298 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 SMARCAD1Q9H4L7 1026 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 VAT1LQ9HCJ6 419 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 PCDHA2Q9Y5H9 948 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 APC2O95996 2303 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 URB1O60287 2271 aaKnown RBP6.37□□□□□ -1.39
ATXN3-226ENST00000554350 WDFY3Q8IZQ1 3526 aa6.37□□□□□ -1.39
ATXN3-226ENST00000554350 A0A1W2PQH9 124 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 A0A1W2PQJ5 194 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 H0Y626 953 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 K7ESF4 209 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 TEX28O15482 410 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 GPAA1O43292 621 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 FIBPO43427 364 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 TRIM16O95361 564 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 CAPNS1P04632 268 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 NCAM1P13591 858 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 GNAT2P19087 354 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 HOXC13P31276 330 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 LRRC32Q14392 662 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 TCEAL1Q15170 157 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 ELF2Q15723 593 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 KIZQ2M2Z5 673 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 QRICH1Q2TAL8 776 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 EEF1DP3Q658K8 133 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 FAM228AQ86W67 206 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 IFNL3Q8IZI9 196 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 CLASRPQ8N2M8 674 aaKnown RBP6.36□□□□□ -1.39
ATXN3-226ENST00000554350 ING5Q8WYH8 240 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 TNPO1Q92973 898 aaKnown RBP6.36□□□□□ -1.39
ATXN3-226ENST00000554350 VN1R3Q9BXE9 311 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 RHOBTB2Q9BYZ6 727 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 C22orf23Q9BZE7 217 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 BRD9Q9H8M2 597 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 RBM12Q9NTZ6 932 aaKnown RBP6.36□□□□□ -1.39
ATXN3-226ENST00000554350 ZDHHC7Q9NXF8 308 aa6.36□□□□□ -1.39
ATXN3-226ENST00000554350 PIAS3Q9Y6X2 628 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms