RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 CTIFO43310 598 aaKnown RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 CTAGE8P0CG41 777 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 PYGMP11217 842 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 MAN1A1P33908 653 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 SNX16P57768 344 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 ELAVL2Q12926 359 aaKnown RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 PIGHQ14442 188 aaPredicted RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 MAPRE1Q15691 268 aaKnown RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 TXNRD3NBQ6F5E7 133 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 ZNF280DQ6N043 979 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 CTAGE6Q86UF2 777 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 CTAGE4Q8IX94 777 aa20.08■□□□□ 0.8
SNRPN-207ENST00000554227 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 ABI2Q9NYB9 513 aaPredicted RBP20.08■□□□□ 0.8
SNRPN-207ENST00000554227 PDGFRAP16234 1089 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 GPD1P21695 349 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 GTF2F1P35269 517 aaKnown RBP eCLIP20.07■□□□□ 0.82e-6■■■■□ 23.7
SNRPN-207ENST00000554227 C2orf54Q08AI8 447 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 LLGL1Q15334 1064 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 ERCC6LQ2NKX8 1250 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 C15orf59Q2T9L4 293 aaPredicted RBP20.07■□□□□ 0.8
SNRPN-207ENST00000554227 CFAP221Q4G0U5 840 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 DCP1BQ8IZD4 617 aaKnown RBP20.07■□□□□ 0.8
SNRPN-207ENST00000554227 SLC39A11Q8N1S5 342 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 NIPA2Q8N8Q9 360 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 COLGALT1Q8NBJ5 622 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 CFAP57Q96MR6 1250 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 ZNF558Q96NG5 402 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 ULBP1Q9BZM6 244 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 EPC1Q9H2F5 836 aa20.07■□□□□ 0.8
SNRPN-207ENST00000554227 ADAM12O43184 909 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 TBC1D4O60343 1298 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 GJB5O95377 273 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RPL17P18621 184 aaKnown RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 TERF1P54274 439 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CKAP4Q07065 602 aaKnown RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 C4orf50Q6ZRC1 276 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ZDHHC17Q8IUH5 632 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 SIX6OS1Q8N1H7 587 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 TTC9BQ8N6N2 239 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 STKLD1Q8NE28 680 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 FNIP1Q8TF40 1166 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RNPC3Q96LT9 517 aaKnown RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CARD9Q9H257 536 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 DMAP1Q9NPF5 467 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 PATJQ8NI35 1801 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CES2O00748 559 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 C2CD2LO14523 706 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 LRCH4O75427 683 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 USP17L7P0C7H9 530 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 TFE3P19532 575 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 GRIK1P39086 918 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ZNF143P52747 638 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ATP11AP98196 1134 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CDO1Q16878 200 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CCDC14Q49A88 953 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RAB41Q5JT25 222 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 TEX35Q5T0J7 233 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 SDHAF4Q5VUM1 108 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 HFE2Q6ZVN8 426 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RSRC2Q7L4I2 434 aaKnown RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 SLC26A9Q7LBE3 791 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RNF168Q8IYW5 571 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RASGEF1CQ8N431 466 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ATAD1Q8NBU5 361 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 RIN2Q8WYP3 895 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ACSF2Q96CM8 615 aaPredicted RBP20.06■□□□□ 0.8
SNRPN-207ENST00000554227 ADAM33Q9BZ11 813 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 KLHL11Q9NVR0 708 aa20.06■□□□□ 0.8
SNRPN-207ENST00000554227 CPB1P15086 417 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 GPR15P49685 360 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 RWDD2BP57060 319 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 USP41Q3LFD5 358 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 ADAT2Q7Z6V5 191 aaKnown RBP20.05■□□□□ 0.8
SNRPN-207ENST00000554227 SCN4BQ8IWT1 228 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 RHOT1Q8IXI2 618 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 SPATA4Q8NEY3 305 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 SCAMP5Q8TAC9 235 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 ACTRT1Q8TDG2 376 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 ZBED2Q9BTP6 218 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 CDY1Q9Y6F8 540 aa20.05■□□□□ 0.8
SNRPN-207ENST00000554227 CEP290O15078 2479 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 OR6C75A6NL08 312 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 EFCAB8A8MWE9 144 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 VNN2O95498 520 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 FGGP02679 453 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 IL1R2P27930 398 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 HTRA4P83105 476 aaPredicted RBP20.04■□□□□ 0.8
SNRPN-207ENST00000554227 PSRC1Q6PGN9 363 aaPredicted RBP20.04■□□□□ 0.8
SNRPN-207ENST00000554227 RNF19BQ6ZMZ0 732 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 ANKS3Q6ZW76 656 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 ZNF572Q7Z3I7 529 aaPredicted RBP20.04■□□□□ 0.8
SNRPN-207ENST00000554227 FAM149B1Q96BN6 582 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 TMEM169Q96HH4 297 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 CNPY3Q9BT09 278 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 AP1M1Q9BXS5 423 aa20.04■□□□□ 0.8
SNRPN-207ENST00000554227 CRISPLD1Q9H336 500 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms