RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 YY2O15391 372 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SLC16A3O15427 465 aaKnown RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 KCNQ3O43525 872 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 CREB3O43889 395 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 NXPH3O95157 252 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 RHOP08100 348 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 CHRM2P08172 466 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 PDHA1P08559 390 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SRGAP2BP0DMP2 458 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 UQCRC1P31930 480 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 GRK6P43250 576 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 PPM1FP49593 454 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 GATMP50440 423 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 BCAT1P54687 386 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 TBCCQ15814 346 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 MAPKAPK3Q16644 382 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SLC5A9Q2M3M2 681 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 ARHGAP15Q53QZ3 475 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 INO80DQ53TQ3 878 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 MANEALQ5VSG8 457 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 USP49Q70CQ1 688 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SPRED1Q7Z699 444 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 TTC30AQ86WT1 665 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 IZUMO1Q8IYV9 350 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 ABRAQ8N0Z2 381 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 FSTL5Q8N475 847 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 FAM109AQ8N4B1 249 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SLC44A3Q8N4M1 653 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 ZNF384Q8TF68 577 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 GLG1Q92896 1179 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 FUBP1Q96AE4 644 aaKnown RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 PGBD1Q96JS3 809 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 Q96MF0 132 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 C17orf80Q9BSJ5 609 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 ALG8Q9BVK2 526 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 DPCDQ9BVM2 203 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 WDR11Q9BZH6 1224 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 TRIM5Q9C035 493 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 INO80BQ9C086 356 aaPredicted RBP4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 MYLK2Q9H1R3 596 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 SERHL2Q9H4I8 314 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 CYP4F11Q9HBI6 524 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 DACT1Q9NYF0 836 aa4.25□□□□□ -1.73
EFCAB11-204ENST00000553871 PIPSLA2A3N6 862 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 SYT5O00445 386 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ORC4O43929 436 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 VIPP01282 170 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ADRB1P08588 477 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 PECAM1P16284 738 aaPredicted RBP4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 MAKP20794 623 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 MST1P26927 711 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 RBL1P28749 1068 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 PDIA3P30101 505 aaKnown RBP4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 NTSR1P30989 418 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 AVPR1BP47901 424 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 CLCN2P51788 898 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 PDE1AP54750 535 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 FSTL1Q12841 308 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 SPARCL1Q14515 664 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 MIIPQ5JXC2 388 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ZNF618Q5T7W0 954 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 RAP1GAP2Q684P5 730 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 VWA1Q6PCB0 445 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 RASGRP3Q8IV61 690 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 LNX2Q8N448 690 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 FAM71BQ8TC56 605 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ABHD5Q8WTS1 349 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 XAGE5Q8WWM1 108 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 CAVIN3Q969G5 261 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 R3HDM4Q96D70 268 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ZNF503Q96F45 646 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 ZBTB45Q96K62 511 aaPredicted RBP4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 FAM227BQ96M60 508 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 MLST8Q9BVC4 326 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 EHD3Q9NZN3 535 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 DKK2Q9UBU2 259 aa4.24□□□□□ -1.73
EFCAB11-204ENST00000553871 A1L4Q6 167 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 C1QTNF3-AMACRE9PGA6 284 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ACKR2O00590 384 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 TRIM38O00635 465 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 NPC1O15118 1278 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 NPHP1O15259 732 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ZSCAN9O15535 394 aaPredicted RBP4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 PROM1O43490 865 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ASNA1O43681 348 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ZNF202O95125 648 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 GLP2RO95838 553 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 FESP07332 822 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ADH4P08319 380 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 HKR1P10072 659 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 EGR2P11161 476 aaPredicted RBP4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 SLC5A2P31639 672 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 LIPAP38571 399 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 HNRNPMP52272 730 aaKnown RBP eCLIP4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ATXN1P54253 815 aaKnown RBP4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 ALDH18A1P54886 795 aaKnown RBP4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 TPTEP56180 551 aa4.23□□□□□ -1.73
EFCAB11-204ENST00000553871 SP2Q02086 613 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms