RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 BGNP21810 368 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CLCN3P51790 818 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 AP3M2P53677 418 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 YWHAEP62258 255 aaKnown RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 DPYSL3Q14195 570 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 KCNJ11Q14654 390 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CRYMQ14894 314 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 KLHL38Q2WGJ6 581 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC45A4Q5BKX6 768 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 SH2D5Q6ZV89 423 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PCGF5Q86SE9 256 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PALM2Q8IXS6 379 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 KCTD6Q8NC69 237 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 DNERQ8NFT8 737 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 SPATA18Q8TC71 538 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 KLRG1Q96E93 195 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PPP1R16BQ96T49 567 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 BCO2Q9BYV7 579 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDT1Q9H211 546 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 KCNK13Q9HB14 408 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 GPATCH2LQ9NWQ4 482 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 DONSONQ9NYP3 566 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 FETUBQ9UGM5 382 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 USP18Q9UMW8 372 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 MCF2LO15068 1137 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 UPP2O95045 317 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 TNNC2P02585 160 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 ITGB3P05106 788 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 DHRS4L1P0CG22 281 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PYGBP11216 843 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 EDNRBP24530 442 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 EFNA5P52803 228 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC8A3P57103 927 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PTPN11Q06124 597 aaPredicted RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDO1Q16878 200 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM102AQ5T9C2 384 aaPredicted RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 ATF7IP2Q5U623 682 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PDIK1LQ8N165 341 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CMASQ8NFW8 434 aaPredicted RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 UBA3Q8TBC4 463 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 FNIP1Q8TF40 1166 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 TTC17Q96AE7 1141 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CFAP36Q96G28 342 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 APOPT1Q96IL0 206 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAXDC2Q96IV6 333 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 MECRQ9BV79 373 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 TMEM120AQ9BXJ8 343 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 CADM1Q9BY67 442 aaKnown RBP7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PHACTR1Q9C0D0 580 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 LHX5Q9H2C1 402 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 SYNCQ9H7C4 482 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 MANSC1Q9H8J5 431 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 PPCSQ9HAB8 311 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 NRBP2Q9NSY0 501 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 HEY2Q9UBP5 337 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 EFR3BQ9Y2G0 817 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 TTLL3Q9Y4R7 772 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 TEX264Q9Y6I9 313 aa7.24□□□□□ -1.25
LINC-ROR-201ENST00000553704 IGKV6-21A0A0C4DH24 114 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 CXorf49A8MYA2 514 aaPredicted RBP7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 C19orf81C9J6K1 198 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 INO80B-WBP1J3KQ70 363 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 GPR25O00155 361 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRAFD1O14545 582 aaPredicted RBP7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 TM9SF1O15321 606 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 B4GALT4O60513 344 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 UGT1A9O60656 530 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 LPXNO60711 386 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 ATP5HO75947 161 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 CALB2P22676 271 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 SERPINB3P29508 390 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 ALDH3A1P30838 453 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 CCNG1P51959 295 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDH6P55285 790 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 YWHAGP61981 247 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 YWHAZP63104 245 aaKnown RBP7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 ROR1Q01973 937 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 NOMO1Q15155 1222 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 TAF11Q15544 211 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZNF667Q5HYK9 610 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 FYB2Q5VWT5 728 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM160B1Q5W0V3 765 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 MAP1SQ66K74 1059 aaPredicted RBP7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 JADE1Q6IE81 842 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 C1orf228Q6PIY5 440 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 DSTYKQ6XUX3 929 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 TSHZ1Q6ZSZ6 1077 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZBTB8OSQ8IWT0 167 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 TTC13Q8NBP0 860 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 STK32AQ8WU08 396 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC44A1Q8WWI5 657 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 COPS5Q92905 334 aa7.23□□□□□ -1.25
LINC-ROR-201ENST00000553704 SKA1Q96BD8 255 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms