RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 WASH6PQ9NQA3 447 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 ITM2CQ9NQX7 267 aa9.32□□□□□ -0.92
GTF2A1-203ENST00000553612 KLRF2D3W0D1 207 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SGCEO43556 437 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 XRCC5P13010 732 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 AKR1B1P15121 316 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PEX2P28328 305 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 GPR68Q15743 365 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 NFE2Q16621 373 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PAPD7Q5XG87 772 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF527Q8NB42 609 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 DCPSQ96C86 337 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF486Q96H40 463 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PBKQ96KB5 322 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 MAGEB18Q96M61 343 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 OSGEPL1Q9H4B0 414 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 DPP7Q9UHL4 492 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 TLL2Q9Y6L7 1015 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 E9PBE3 544 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM13AO94988 1023 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 GH2P01242 217 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 JUNDP17535 347 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PDHA2P29803 388 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 HERVK_113P62684 666 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 DSG2Q14126 1118 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 BBS5Q8N3I7 341 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 LSMEM1Q8N8F7 131 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 JPH3Q8WXH2 748 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 TM6SF1Q9BZW5 370 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 POLR1BQ9H9Y6 1135 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 NUP50Q9UKX7 468 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ANGEL1Q9UNK9 670 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 H0Y858 1186 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SCAMP2O15127 329 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 CYP26A1O43174 497 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 HAAOP46952 286 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PRPSAP1Q14558 356 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 TRMT5Q32P41 509 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 RUNDC3AQ59EK9 446 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 METTL2BQ6P1Q9 378 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 POTEHQ6S545 545 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 GAB3Q8WWW8 586 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 METTL2AQ96IZ6 378 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 RERGLQ9H628 205 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 STN1Q9H668 368 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 TRPS1Q9UHF7 1281 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJC16Q9Y2G8 782 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 M0QX08 132 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PDPK1O15530 556 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF254O75437 659 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 HEXBP07686 556 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 L1CAMP32004 1257 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 CYP2J2P51589 502 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 WDR72Q3MJ13 1102 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 KLHL12Q53G59 568 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 CRLF3Q8IUI8 442 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 OR5H6Q8NGV6 325 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 PHF20Q9BVI0 1012 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 CLEC4MQ9H2X3 399 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 TRABDQ9H4I3 376 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 ERVK-19Q9WJR5 959 aa9.31□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM47DPA6NHR8 397 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 H0YIN7 160 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 TLR3O15455 904 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF862O60290 1169 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 FKBP6O75344 327 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 SPAG6O75602 509 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 CLK1P49759 484 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 DLG1Q12959 904 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 DMC1Q14565 340 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RNASE11Q8TAA1 199 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 ZNF75CPQ92670 426 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PEX13Q92968 403 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PYM1Q9BRP8 204 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PAQR5Q9NXK6 330 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RTCAO00442 366 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 FCER2P06734 321 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 PROS1P07225 676 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 GNAZP19086 355 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 CCNA2P20248 432 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 TRAP1Q12931 704 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 TGFBIQ15582 683 aa9.3□□□□□ -0.92
GTF2A1-203ENST00000553612 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms