RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 GKN1Q9NS71 199 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 FAM86C1Q9NVL1 165 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 GTSE1Q9NYZ3 720 aa25.02■■□□□ 1.6
TDP1-205ENST00000553527 CILPO75339 1184 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 FGFR1OPO95684 399 aaKnown RBP25.01■■□□□ 1.59
TDP1-205ENST00000553527 USP17L7P0C7H9 530 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 YWHAQP27348 245 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 SOX9P48436 509 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 FMO5P49326 533 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 NUBP1P53384 320 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 TNK2Q07912 1038 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 ANO6Q4KMQ2 910 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 ATOH1Q92858 354 aaPredicted RBP25.01■■□□□ 1.59
TDP1-205ENST00000553527 JAKMIP2Q96AA8 810 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 HEXIM2Q96MH2 286 aaKnown RBP25.01■■□□□ 1.59
TDP1-205ENST00000553527 SLITRK1Q96PX8 696 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 TTLL2Q9BWV7 592 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 DNAI2Q9GZS0 605 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 TRPV5Q9NQA5 729 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 CISHQ9NSE2 258 aa25.01■■□□□ 1.59
TDP1-205ENST00000553527 CHORDC1Q9UHD1 332 aaPredicted RBP25.01■■□□□ 1.59
TDP1-205ENST00000553527 COL4A2P08572 1712 aa25■■□□□ 1.59
TDP1-205ENST00000553527 SOBPA7XYQ1 873 aa25■■□□□ 1.59
TDP1-205ENST00000553527 ARNTLO00327 626 aa25■■□□□ 1.59
TDP1-205ENST00000553527 GLULP15104 373 aa25■■□□□ 1.59
TDP1-205ENST00000553527 TARSP26639 723 aaKnown RBP25■■□□□ 1.59
TDP1-205ENST00000553527 CC2D1AQ6P1N0 951 aaPredicted RBP25■■□□□ 1.59
TDP1-205ENST00000553527 FAM3CQ92520 227 aa25■■□□□ 1.59
TDP1-205ENST00000553527 FBXO32Q969P5 355 aa25■■□□□ 1.59
TDP1-205ENST00000553527 MED15Q96RN5 788 aa25■■□□□ 1.59
TDP1-205ENST00000553527 SMOQ99835 787 aa25■■□□□ 1.59
TDP1-205ENST00000553527 FUCA2Q9BTY2 467 aa25■■□□□ 1.59
TDP1-205ENST00000553527 NAT10Q9H0A0 1025 aaKnown RBP25■■□□□ 1.59
TDP1-205ENST00000553527 MRPS17Q9Y2R5 130 aaKnown RBP25■■□□□ 1.59
TDP1-205ENST00000553527 COQ4Q9Y3A0 265 aa25■■□□□ 1.59
TDP1-205ENST00000553527 ZNF840PA6NDX5 716 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 MAN2B1O00754 1011 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 RTN3O95197 1032 aaPredicted RBP24.99■■□□□ 1.59
TDP1-205ENST00000553527 FAM200BP0CF97 657 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 F5P12259 2224 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 HELZP42694 1942 aaKnown RBP24.99■■□□□ 1.59
TDP1-205ENST00000553527 SLC5A3P53794 718 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 TRIM68Q6AZZ1 485 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 ZMIZ2Q8NF64 920 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 RIN3Q8TB24 985 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 NELL2Q99435 816 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 KIF9Q9HAQ2 790 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 GCNT4Q9P109 453 aa24.99■■□□□ 1.59
TDP1-205ENST00000553527 SHISA7A6NL88 538 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 PHOX2BQ99453 314 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 HNRNPABQ99729 332 aaKnown RBP24.98■■□□□ 1.59
TDP1-205ENST00000553527 RNF38Q9H0F5 515 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 EBF3Q9H4W6 596 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 DLGAP2Q9P1A6 1054 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 MYO16Q9Y6X6 1858 aa24.98■■□□□ 1.59
TDP1-205ENST00000553527 TNFRSF10BO14763 440 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 NCAM2O15394 837 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 GNA14O95837 355 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 PPP3CCP48454 512 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 PLCB2Q00722 1185 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 CUL2Q13617 745 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 ANGPT1Q15389 498 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 PPP1R26Q5T8A7 1209 aaPredicted RBP24.97■■□□□ 1.59
TDP1-205ENST00000553527 TMEM176AQ96HP8 235 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 FAXDC2Q96IV6 333 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 CACNA1IQ9P0X4 2223 aa24.97■■□□□ 1.59
TDP1-205ENST00000553527 PDE6CP51160 858 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 RAD23BP54727 409 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 CETN1Q12798 172 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 KCNH2Q12809 1159 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 ZNF268Q14587 947 aaPredicted RBP24.96■■□□□ 1.59
TDP1-205ENST00000553527 MTF1Q14872 753 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 CLEC20AQ6ZU45 233 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 TTC39CQ8N584 583 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 SLC4A11Q8NBS3 891 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 ENOX1Q8TC92 643 aaKnown RBP24.96■■□□□ 1.59
TDP1-205ENST00000553527 SH3RF2Q8TEC5 729 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 OSBPL6Q9BZF3 934 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 CSNK1G1Q9HCP0 422 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 SMPD4Q9NXE4 827 aa24.96■■□□□ 1.59
TDP1-205ENST00000553527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.96■■□□□ 1.59
TDP1-205ENST00000553527 SPECC1L-ADORA2AF8WAN1 911 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 ARSAP15289 507 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 MYL5Q02045 173 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 ITPRIPL2Q3MIP1 535 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 TRIM59Q8IWR1 403 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 FAM83CQ9BQN1 747 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 IRF2BPLQ9H1B7 796 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 THAP9Q9H5L6 903 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 C8orf33Q9H7E9 229 aaPredicted RBP24.95■■□□□ 1.58
TDP1-205ENST00000553527 SPATA6Q9NWH7 488 aaPredicted RBP24.95■■□□□ 1.58
TDP1-205ENST00000553527 GMIPQ9P107 970 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 NFE2L3Q9Y4A8 694 aa24.95■■□□□ 1.58
TDP1-205ENST00000553527 PATJQ8NI35 1801 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 ATG2BQ96BY7 2078 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 RUNX3Q13761 415 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 ZNF77Q15935 545 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 GPRIN1Q7Z2K8 1008 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 FAM114A1Q8IWE2 563 aa24.94■■□□□ 1.58
TDP1-205ENST00000553527 PDZD8Q8NEN9 1154 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms