RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 RXFP1Q9HBX9 757 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 PRKAG3Q9UGI9 489 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-205ENST00000553474 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 KAT6AQ92794 2004 aa13.52□□□□□ -0.25
SHMT2-205ENST00000553474 CFAP69A5D8W1 941 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 MGRN1O60291 552 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 KRT15P19012 456 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 MIPP30301 263 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 MNAT1P51948 309 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 RIPK1Q13546 671 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 DCAF4L1Q3SXM0 396 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 GALNTL6Q49A17 601 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 C17orf99Q6UX52 265 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ZDHHC17Q8IUH5 632 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 TEKT4Q8WW24 435 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 CPT1BQ92523 772 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ACAP3Q96P50 834 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 TACO1Q9BSH4 297 aaKnown RBP13.51□□□□□ -0.25
SHMT2-205ENST00000553474 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 TRABDQ9H4I3 376 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 ZWILCHQ9H900 591 aa13.51□□□□□ -0.25
SHMT2-205ENST00000553474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHMT2-205ENST00000553474 A0A087WZ62 844 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 DPYSL4O14531 572 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 STRNO43815 780 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 ZWINTO95229 277 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 ARF4P18085 180 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 GPD1P21695 349 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SLC8A1P32418 973 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 CDH8P55286 799 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SNCBQ16143 134 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SPRED3Q2MJR0 410 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SLC10A6Q3KNW5 377 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 BOLA3Q53S33 107 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SPDYAQ5MJ70 313 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 RFX6Q8HWS3 928 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 KIAA0319LQ8IZA0 1049 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 HEXIM2Q96MH2 286 aaKnown RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 FDXACB1Q9BRP7 624 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 MAK16Q9BXY0 300 aaKnown RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 C2CD4BA6NLJ0 364 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 GJB1P08034 283 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 RBP3P10745 1247 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 ETS1P14921 441 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 TAC1P20366 129 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 GRM5P41594 1212 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 BNIP1Q12981 228 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 PDK4Q16654 411 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 ZNF792Q3KQV3 632 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 FAM102AQ5T9C2 384 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-205ENST00000553474 PRUNE1Q86TP1 453 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 CCDC63Q8NA47 563 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 STK32AQ8WU08 396 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 COPS5Q92905 334 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 SAGE1Q9NXZ1 904 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 DPP3Q9NY33 737 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
SHMT2-205ENST00000553474 CASP8AP2Q9UKL3 1982 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 POC1B-GALNT4F8VUJ3 575 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TM9SF1O15321 606 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 CHADO15335 359 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TYROBPO43914 113 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 PRPSAP2O60256 369 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 ATP5HO75947 161 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 HOXD8P13378 290 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TGM2P21980 687 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 RPL22P35268 128 aaKnown RBP13.49□□□□□ -0.25
SHMT2-205ENST00000553474 ROR1Q01973 937 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 RNASELQ05823 741 aaKnown RBP13.49□□□□□ -0.25
SHMT2-205ENST00000553474 FASTKD3Q14CZ7 662 aaKnown RBP13.49□□□□□ -0.25
SHMT2-205ENST00000553474 KCNT1Q5JUK3 1230 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 TAPT1Q6NXT6 567 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 ARCQ7LC44 396 aa13.49□□□□□ -0.25
SHMT2-205ENST00000553474 GDAP1Q8TB36 358 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms