RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 FBXO32Q969P5 355 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 NT5C1BQ96P26 610 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 LRRC3BQ96PB8 259 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 TWNKQ96RR1 684 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 CYP2S1Q96SQ9 504 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 SMOQ99835 787 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 DUSP16Q9BY84 665 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 SMG9Q9H0W8 520 aaKnown RBP16.24■□□□□ 0.19
SHMT2-204ENST00000553324 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
SHMT2-204ENST00000553324 WDFY4Q6ZS81 3184 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 ABL1P00519 1130 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 TCF3P15923 654 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 ADORA2BP29275 332 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 UBXN2BQ14CS0 331 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 PDGFRLQ15198 375 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 CCDC105Q8IYK2 499 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 ARL14EPQ8N8R7 260 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-204ENST00000553324 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 FAM3CQ92520 227 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 UBXN6Q9BZV1 441 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 LTB4R2Q9NPC1 389 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 GKN1Q9NS71 199 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 ARHGAP26Q9UNA1 814 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 PIAS3Q9Y6X2 628 aa16.23■□□□□ 0.19
SHMT2-204ENST00000553324 C2orf78A6NCI8 922 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 TUBP50607 506 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 RAD23BP54727 409 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 SLC7A9P82251 487 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 IFRD2Q12894 506 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-204ENST00000553324 LRMPQ12912 555 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 ITPRIPL2Q3MIP1 535 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 PPP1R26Q5T8A7 1209 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-204ENST00000553324 ARHGAP17Q68EM7 881 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 CLEC20AQ6ZU45 233 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 RALGPS2Q86X27 583 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-204ENST00000553324 SLC4A11Q8NBS3 891 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 ZMIZ2Q8NF64 920 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 SCAMP5Q8TAC9 235 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 EXOC4Q96A65 974 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 JAKMIP2Q96AA8 810 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 FAM81BQ96LP2 452 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 FAM83CQ9BQN1 747 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 FOXQ1Q9C009 403 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 TLR8Q9NR97 1041 aaKnown RBP16.22■□□□□ 0.19
SHMT2-204ENST00000553324 CHORDC1Q9UHD1 332 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-204ENST00000553324 CCL26Q9Y258 94 aa16.22■□□□□ 0.19
SHMT2-204ENST00000553324 BEST1O76090 585 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 MBD3O95983 291 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 DCNP07585 359 aaKnown RBP16.21■□□□□ 0.19
SHMT2-204ENST00000553324 CD72P21854 359 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 PLA2G5P39877 138 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 GCNT1Q02742 428 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 TCF15Q12870 199 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 RUNX3Q13761 415 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 MTF1Q14872 753 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHMT2-204ENST00000553324 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 ANKRD52Q8NB46 1076 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 PRSS33Q8NF86 280 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 LMO3Q8TAP4 145 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 SH3RF2Q8TEC5 729 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 OSCP1Q8WVF1 389 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 CLDN23Q96B33 292 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
SHMT2-204ENST00000553324 ARID3AQ99856 593 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 DLGAP2Q9P1A6 1054 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
SHMT2-204ENST00000553324 OLFM2O95897 454 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 OAS1P00973 400 aaKnown RBP16.2■□□□□ 0.18
SHMT2-204ENST00000553324 PAEPP09466 180 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 ZDHHC11BP0C7U3 371 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 VDRP11473 427 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 RPS9P46781 194 aaKnown RBP16.2■□□□□ 0.18
SHMT2-204ENST00000553324 PSEN1P49768 467 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 NR1H3Q13133 447 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 ZNF77Q15935 545 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 SGO2Q562F6 1265 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 SMYD5Q6GMV2 418 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 ENOSF1Q7L5Y1 443 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 GPT2Q8TD30 523 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 SLC22A12Q96S37 553 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 IER2Q9BTL4 223 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 RNF38Q9H0F5 515 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 DUS2Q9NX74 493 aaKnown RBP16.2■□□□□ 0.18
SHMT2-204ENST00000553324 GTSE1Q9NYZ3 720 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 HESX1Q9UBX0 185 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 ZNF318Q5VUA4 2279 aa16.2■□□□□ 0.18
SHMT2-204ENST00000553324 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
SHMT2-204ENST00000553324 SPECC1L-ADORA2AF8WAN1 911 aa16.19■□□□□ 0.18
SHMT2-204ENST00000553324 SLC9A3R1O14745 358 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-204ENST00000553324 ACO1P21399 889 aaKnown RBP16.19■□□□□ 0.18
SHMT2-204ENST00000553324 TARSP26639 723 aaKnown RBP16.19■□□□□ 0.18
SHMT2-204ENST00000553324 MTIF2P46199 727 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms