RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 FHOD1Q9Y613 1164 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 NCANO14594 1321 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 PI4K2BG5E9Z4 385 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 TULP2O00295 520 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 NARSO43776 548 aaKnown RBP14.92□□□□□ -0.02
PTCH1-226ENST00000553011 RTN3O95197 1032 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-226ENST00000553011 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-226ENST00000553011 YWHAQP27348 245 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 VIPR2P41587 438 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 ZXDAP98168 799 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 TDGQ13569 410 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 MAB21L3Q8N8X9 362 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 NXPE3Q969Y0 559 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 RSPRY1Q96DX4 576 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 SMG9Q9H0W8 520 aaKnown RBP14.92□□□□□ -0.02
PTCH1-226ENST00000553011 ZFP14Q9HCL3 533 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 ACP6Q9NPH0 428 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 IL37Q9NZH6 218 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 EHD2Q9NZN4 543 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 TRPM5Q9NZQ8 1165 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 KIF26AQ9ULI4 1882 aaPredicted RBP14.92□□□□□ -0.02
PTCH1-226ENST00000553011 TICRRQ7Z2Z1 1910 aa14.92□□□□□ -0.02
PTCH1-226ENST00000553011 C2orf78A6NCI8 922 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 FOXN3O00409 490 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-226ENST00000553011 PRAMEF12O95522 483 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 ALADP13716 330 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 UCHL3P15374 230 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 BCAT1P54687 386 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 UBXN1Q04323 297 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 PDE4CQ08493 712 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 RAPGEF1Q13905 1077 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 SYCP1Q15431 976 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 LCLAT1Q6UWP7 414 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 PIGZQ86VD9 579 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 MON1AQ86VX9 555 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 ARID3BQ8IVW6 561 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-226ENST00000553011 UBA3Q8TBC4 463 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 SLITRK1Q96PX8 696 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 SLC22A12Q96S37 553 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 NAA15Q9BXJ9 866 aaKnown RBP14.91□□□□□ -0.02
PTCH1-226ENST00000553011 GANQ9H2C0 597 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 TRPV4Q9HBA0 871 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 TRPC7Q9HCX4 862 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 PNPLA8Q9NP80 782 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 PLCB1Q9NQ66 1216 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 GMIPQ9P107 970 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 HESX1Q9UBX0 185 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTCH1-226ENST00000553011 SIK3Q9Y2K2 1263 aa14.91□□□□□ -0.02
PTCH1-226ENST00000553011 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 ZNF840PA6NDX5 716 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 EPHB6O15197 1021 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 TEX33O43247 280 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 ECI2O75521 394 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 CAVIN2O95810 425 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 ABL1P00519 1130 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 DDX6P26196 483 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 GNA15P30679 374 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 PGFP49763 221 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 BST2Q10589 180 aaKnown RBP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 DRAP1Q14919 205 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 CNGA2Q16280 664 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 PKDCCQ504Y2 493 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 CMTM8Q8IZV2 173 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 ARL14EPQ8N8R7 260 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 EDAQ92838 391 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 ELSPBP1Q96BH3 223 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 CYP2S1Q96SQ9 504 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 FAM207AQ9NSI2 230 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 COMMD8Q9NX08 183 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 CHORDC1Q9UHD1 332 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-226ENST00000553011 DUSP12Q9UNI6 340 aa14.9□□□□□ -0.02
PTCH1-226ENST00000553011 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 HEPACAM2A8MVW5 462 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 M0QYV0 167 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 XPO1O14980 1071 aaKnown RBP14.89□□□□□ -0.03
PTCH1-226ENST00000553011 CYP26A1O43174 497 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 THAP12O43422 761 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 WEE1P30291 646 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 AVPR1AP37288 418 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 KIF11P52732 1056 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 GPC5P78333 572 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 GRM2Q14416 872 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 STILQ15468 1287 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 LRSAM1Q6UWE0 723 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 VITQ6UXI7 678 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 UBALD2Q8IYN6 164 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 PDZD8Q8NEN9 1154 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 ZNF606Q8WXB4 792 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 SECISBP2LQ93073 1101 aaKnown RBP14.89□□□□□ -0.03
PTCH1-226ENST00000553011 PCMTD1Q96MG8 357 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-226ENST00000553011 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-226ENST00000553011 LRRC3BQ96PB8 259 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 ERGIC2Q96RQ1 377 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 UBXN6Q9BZV1 441 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 TSPY26PQ9H489 355 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 FBXO44Q9H4M3 255 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 ZMYM5Q9UJ78 669 aa14.89□□□□□ -0.03
PTCH1-226ENST00000553011 CCL26Q9Y258 94 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms