RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TDRD10Q5VZ19 366 aaKnown RBP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PKN3Q6P5Z2 889 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 VSTM1Q6UX27 236 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 DDX42Q86XP3 938 aaKnown RBP eCLIP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 PDILTQ8N807 584 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 OR6B3Q8NGW1 331 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 MYLPFQ96A32 169 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 CLIC6Q96NY7 704 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 CYP2S1Q96SQ9 504 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 CBWD1Q9BRT8 395 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 EDEM2Q9BV94 578 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 IKZF4Q9H2S9 585 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 C2orf42Q9NWW7 574 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 FBXO2Q9UK22 296 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-217ENST00000552801 FRYLO94915 3013 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 WDR87Q6ZQQ6 2873 aa9.28□□□□□ -0.92
TMEM116-217ENST00000552801 KHNYNO15037 678 aaKnown RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ADH1CP00326 375 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 APODP05090 189 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 GNL1P36915 607 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 RAP1GAPP47736 663 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 DHPSP49366 369 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 USP4Q13107 963 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 BYSLQ13895 437 aaKnown RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF77Q15935 545 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 PLK5Q496M5 336 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 BTBD8Q5XKL5 378 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ANO7Q6IWH7 933 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 CYP2U1Q7Z449 544 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 TMEM150AQ86TG1 271 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 WDR49Q8IV35 697 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ZC3H10Q96K80 434 aaKnown RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 CEP295NLQ96MC4 621 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ZSCAN16Q9H4T2 348 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 INTS13Q9NVM9 706 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 ARHGAP26Q9UNA1 814 aa9.27□□□□□ -0.93
TMEM116-217ENST00000552801 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
TMEM116-217ENST00000552801 C2orf78A6NCI8 922 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 OTOL1A6NHN0 477 aaPredicted RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 KRT37O76014 449 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 HSP90AA1P07900 732 aaKnown RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 MBL2P11226 248 aaPredicted RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 NOVA1P51513 510 aaKnown RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CYP2J2P51589 502 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CASP5P51878 434 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 RESTQ13127 1097 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CUL4AQ13619 759 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 EML3Q32P44 896 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 WDR44Q5JSH3 913 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 PSAPL1Q6NUJ1 521 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 OSTM1Q86WC4 334 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC33Q8N5R6 958 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 MYCBPAPQ8TBZ2 947 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CCDC127Q96BQ5 260 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 DNAJC19Q96DA6 116 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SPATA17Q96L03 361 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 TPSD1Q9BZJ3 242 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 ELOVL4Q9GZR5 314 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 DNAI2Q9GZS0 605 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 TNMDQ9H2S6 317 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 CUEDC2Q9H467 287 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SMOC1Q9H4F8 434 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SMPD4Q9NXE4 827 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 HSPBP1Q9NZL4 362 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 NXF1Q9UBU9 619 aaKnown RBP9.26□□□□□ -0.93
TMEM116-217ENST00000552801 EBF1Q9UH73 591 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 INVSQ9Y283 1065 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SH3BP1Q9Y3L3 701 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 SDK1Q7Z5N4 2213 aa9.26□□□□□ -0.93
TMEM116-217ENST00000552801 THADAQ6YHU6 1953 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 A8MXQ7 604 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 LEFTY2O00292 366 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 GABRDO14764 452 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 DCLK1O15075 740 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 ATP2C2O75185 946 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 TADA3O75528 432 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 RTN3O95197 1032 aaPredicted RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 SYT1P21579 422 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 RDXP35241 583 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 DPP6P42658 865 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 ATXN3P54252 364 aaPredicted RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 MRPS21P82921 87 aaKnown RBP9.25□□□□□ -0.93
TMEM116-217ENST00000552801 GOLGA8FQ08AF8 430 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 GOLGA8DPQ0D2H9 430 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 BIRC3Q13489 604 aa9.25□□□□□ -0.93
TMEM116-217ENST00000552801 SLC39A14Q15043 492 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms