RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 DEPDC1BQ8WUY9 529 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ASIC4Q96FT7 647 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SMARCD1Q96GM5 515 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CEP295NLQ96MC4 621 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ZSWIM3Q96MP5 696 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ASB16Q96NS5 453 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SLITRK1Q96PX8 696 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 RPP25Q9BUL9 199 aaKnown RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SRRTQ9BXP5 876 aaKnown RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 B3GNT5Q9BYG0 378 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 PLA2G2FQ9BZM2 168 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 NIF3L1Q9GZT8 377 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 XYLT2Q9H1B5 865 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 KCNH6Q9H252 994 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 DPEP3Q9H4B8 488 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CLSTN2Q9H4D0 955 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CYP3A43Q9HB55 503 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ZNF334Q9HCZ1 680 aaPredicted RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CRTAC1Q9NQ79 661 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ARHGEF3Q9NR81 526 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SLC2A4RGQ9NR83 387 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 TECTAO75443 2155 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CUL9Q8IWT3 2517 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 TRAV19A0A0A6YYK7 116 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 F8VP50 259 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CLDN5O00501 218 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MAN2B1O00754 1011 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MOSPD3O75425 235 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 NOL4O94818 638 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PDGFBP01127 241 aaPredicted RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 F11P03951 625 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CKMP06732 381 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CCDC130P13994 396 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 YWHAQP27348 245 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 ADORA2BP29275 332 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MTIF2P46199 727 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PPP3CCP48454 512 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FMO5P49326 533 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CLCN5P51795 746 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PMS1P54277 932 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PRKCQQ04759 706 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 LRMPQ12912 555 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 UBXN2BQ14CS0 331 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MLF2Q15773 248 aaPredicted RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 C1orf220Q5T0J3 134 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 STXBP5Q5T5C0 1151 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 TXNDC8Q6A555 127 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 SASS6Q6UVJ0 657 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 VITQ6UXI7 678 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 TPRG1Q6ZUI0 275 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 GAREM2Q75VX8 874 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 LIMS2Q7Z4I7 341 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FAM35AQ86V20 835 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FAM114A1Q8IWE2 563 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CMTM8Q8IZV2 173 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 NUP93Q8N1F7 819 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CELF5Q8N6W0 485 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MLKLQ8NB16 471 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PDZD8Q8NEN9 1154 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 BPIFB1Q8TDL5 484 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 DNASE1L2Q92874 299 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FBXO32Q969P5 355 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 JAKMIP2Q96AA8 810 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FAM122AQ96E09 287 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 CYFIP2Q96F07 1278 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 C8orf48Q96LL4 319 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 HEXIM2Q96MH2 286 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 NT5C1BQ96P26 610 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 PKMYT1Q99640 499 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 LRRC3Q9BY71 257 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 NACA2Q9H009 215 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 SDCBP2Q9H190 292 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 IRF2BPLQ9H1B7 796 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 TBC1D17Q9HA65 648 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 KIF9Q9HAQ2 790 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 DMAP1Q9NPF5 467 aaPredicted RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 KRT82Q9NSB4 513 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 FAM49BQ9NUQ9 324 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 EVA1BQ9NVM1 165 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 RAPGEFL1Q9UHV5 662 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 RWDD2AQ9UIY3 292 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 MRPS17Q9Y2R5 130 aaKnown RBP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 SIT1Q9Y3P8 196 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.26□□□□□ -1.41
CCDC65-204ENST00000552188 VCANP13611 3396 aa6.26□□□□□ -1.41
CCDC65-204ENST00000552188 KANSL1LA0AUZ9 987 aa6.25□□□□□ -1.41
CCDC65-204ENST00000552188 KRBA1A5PL33 1030 aa6.25□□□□□ -1.41
CCDC65-204ENST00000552188 SOBPA7XYQ1 873 aa6.25□□□□□ -1.41
CCDC65-204ENST00000552188 PES1O00541 588 aaKnown RBP6.25□□□□□ -1.41
CCDC65-204ENST00000552188 CHADO15335 359 aa6.25□□□□□ -1.41
CCDC65-204ENST00000552188 F12P00748 615 aaPredicted RBP6.25□□□□□ -1.41
CCDC65-204ENST00000552188 AFPP02771 609 aaKnown RBP6.25□□□□□ -1.41
CCDC65-204ENST00000552188 TPM2P07951 284 aa6.25□□□□□ -1.41
CCDC65-204ENST00000552188 FAM200BP0CF97 657 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms