RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TIE1P35590 1138 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 MAPK8P45983 427 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 USP46P62068 366 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ZXDBP98169 803 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 SURF1Q15526 300 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 DUOXA2Q1HG44 320 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 GAB4Q2WGN9 574 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ARMCX6Q7L4S7 300 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 LIMS2Q7Z4I7 341 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 TMEFF1Q8IYR6 380 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 IL17RCQ8NAC3 791 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 KBTBD7Q8WVZ9 684 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ZCCHC14Q8WYQ9 949 aaKnown RBP15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 GATA6Q92908 595 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 TMEM121BQ9BXQ6 578 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 CRTAC1Q9NQ79 661 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 INTS13Q9NVM9 706 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 SMPD4Q9NXE4 827 aa15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.14■□□□□ 0.01
CHMP1A-210ENST00000551981 SGK1O00141 431 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 TOP3BO95985 862 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 PDGFRBP09619 1106 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 ADH5P11766 374 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 ENGP17813 658 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 WARSP23381 471 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 HOXD12P35452 270 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 GRIA2P42262 883 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 TNFRSF4P43489 277 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 SLC6A11P48066 632 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 CASP5P51878 434 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 ATXN3P54252 364 aaPredicted RBP15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 TDRD10Q5VZ19 366 aaKnown RBP15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 LYSMD4Q5XG99 296 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 SCARA3Q6AZY7 606 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 USP49Q70CQ1 688 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 PGBD3Q8N328 593 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 HMGB4Q8WW32 186 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 RLN3Q8WXF3 142 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 PCED1BQ96HM7 432 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 C8orf48Q96LL4 319 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 SLITRK1Q96PX8 696 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 RNF38Q9H0F5 515 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 SNX25Q9H3E2 840 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 CFAP97Q9P2B7 532 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 TBC1D14Q9P2M4 693 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 NEUROG3Q9Y4Z2 214 aa15.13■□□□□ 0.01
CHMP1A-210ENST00000551981 MYOFQ9NZM1 2061 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 CEP192Q8TEP8 1941 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 A0A0A0MRY4 1105 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 TCRBV21S2A2A0A5A6 115 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 F8VP50 259 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 OLFM2O95897 454 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 OAS1P00973 400 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 MBL2P11226 248 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 HNRNPLP14866 589 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 RDXP35241 583 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 PTGER3P43115 390 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 KDSRQ06136 332 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 PREPLQ4J6C6 727 aaPredicted RBP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 MDH1BQ5I0G3 518 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 KIAA1211LQ6NV74 962 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 SLC23A3Q6PIS1 610 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 RHBDF2Q6PJF5 856 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 STXBP4Q6ZWJ1 553 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 HS2ST1Q7LGA3 356 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 TRMT11Q7Z4G4 463 aaKnown RBP15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 HDDC3Q8N4P3 179 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 OR5B17Q8NGF7 314 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 CEP76Q8TAP6 659 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 PANK4Q9NVE7 773 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 DMXL2Q8TDJ6 3036 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 GON4LQ3T8J9 2241 aa15.12■□□□□ 0.01
CHMP1A-210ENST00000551981 FRMD3A2A2Y4 597 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 ANTXRLA6NF34 631 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 SRRM3A6NNA2 597 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 UPK3BL1B0FP48 263 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 UPK3BL2E5RIL1 263 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 AP5Z1O43299 807 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 CFIP05156 583 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 GNL1P36915 607 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 STAT6P42226 847 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 KIR2DL1P43626 348 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 SIM1P81133 766 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 TAF10Q12962 218 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 COL9A2Q14055 689 aaPredicted RBP15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 MAP7D1Q3KQU3 841 aa15.11■□□□□ 0.01
CHMP1A-210ENST00000551981 BTBD8Q5XKL5 378 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms