RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 SLITRK1Q96PX8 696 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 SMOQ99835 787 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 FBXO44Q9H4M3 255 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 KRT82Q9NSB4 513 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
PTCH1-225ENST00000551845 GOLGA6L19H0YKK7 550 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 DPYSL4O14531 572 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 NPR3P17342 541 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 USP8P40818 1118 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 UBXN1Q04323 297 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 IFRD2Q12894 506 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 TAF10Q12962 218 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 IQCB1Q15051 598 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 STILQ15468 1287 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 CNGA2Q16280 664 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 FILIP1LQ4L180 1135 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 FAM78AQ5JUQ0 283 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 KLHDC7AQ5VTJ3 777 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 GJB7Q6PEY0 223 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 CLEC20AQ6ZU45 233 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 MON1AQ86VX9 555 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 ARID3BQ8IVW6 561 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 UBALD2Q8IYN6 164 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 STKLD1Q8NE28 680 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 ZMIZ2Q8NF64 920 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 PCMTD1Q96MG8 357 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 ZSWIM3Q96MP5 696 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 SLC46A2Q9BY10 475 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 MFSD1Q9H3U5 465 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 CHORDC1Q9UHD1 332 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-225ENST00000551845 CNTN6Q9UQ52 1028 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 NUMBLQ9Y6R0 609 aa11.23□□□□□ -0.61
PTCH1-225ENST00000551845 TNFRSF10BO14763 440 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 MED7O43513 233 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 ECI2O75521 394 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 ABL1P00519 1130 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 HDCP19113 662 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 WEE1P30291 646 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 AVPR1AP37288 418 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 PDE6CP51160 858 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 SLC5A3P53794 718 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 BPIFB4P59827 614 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 USP46P62068 366 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 CYP4F8P98187 520 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 APBA1Q02410 837 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 PTK2Q05397 1052 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 HTR4Q13639 388 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TANGO2Q6ICL3 276 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TMEM150AQ86TG1 271 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 CMTM8Q8IZV2 173 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 ST13P5Q8NFI4 369 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-225ENST00000551845 SCAMP5Q8TAC9 235 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 FGF14Q92915 247 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 FBXO32Q969P5 355 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 ELSPBP1Q96BH3 223 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 RPP25Q9BUL9 199 aaKnown RBP11.22□□□□□ -0.61
PTCH1-225ENST00000551845 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
PTCH1-225ENST00000551845 HSD3B7Q9H2F3 369 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TRPV4Q9HBA0 871 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 CBX8Q9HC52 389 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 PNPLA8Q9NP80 782 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 IL37Q9NZH6 218 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 TSPAN16Q9UKR8 245 aa11.22□□□□□ -0.61
PTCH1-225ENST00000551845 ZNF840PA6NDX5 716 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 O00370 1275 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 FOXN3O00409 490 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-225ENST00000551845 SERPINC1P01008 464 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 ATP1A3P13637 1013 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 UCHL3P15374 230 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 PFKLP17858 780 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 RFX1P22670 979 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 VIPR2P41587 438 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.61
PTCH1-225ENST00000551845 RAPGEF1Q13905 1077 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 GOLGA7BQ2TAP0 167 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 STXBP5Q5T5C0 1151 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-225ENST00000551845 LUZP1Q86V48 1076 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 PIGZQ86VD9 579 aa11.21□□□□□ -0.61
PTCH1-225ENST00000551845 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms