RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CD58P19256 250 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 FZD5Q13467 585 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 CCDC40Q4G0X9 1142 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 ZNF687Q8N1G0 1237 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 PDZD8Q8NEN9 1154 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 TATDN2Q93075 761 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 SMOQ99835 787 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 FAM49BQ9NUQ9 324 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 ARHGAP26Q9UNA1 814 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 CTNND2Q9UQB3 1225 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 FAM92AA1XBS5 289 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 FGFR1OPO95684 399 aaKnown RBP20.12■□□□□ 0.81
DDX54-208ENST00000551344 FAM200BP0CF97 657 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
DDX54-208ENST00000551344 FMO5P49326 533 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 ITPRIPL2Q3MIP1 535 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 ZMIZ2Q8NF64 920 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 FBXO32Q969P5 355 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 CISHQ9NSE2 258 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 PIEZO1Q92508 2521 aa20.12■□□□□ 0.81
DDX54-208ENST00000551344 SPECC1L-ADORA2AF8WAN1 911 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 P4HA2O15460 535 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 BEST1O76090 585 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 ABL1P00519 1130 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 SLC5A3P53794 718 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 STX17P56962 302 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 MAP3K7CLP57077 242 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 SLC7A9P82251 487 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 TNK2Q07912 1038 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 CETN1Q12798 172 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 IFRD2Q12894 506 aaPredicted RBP20.11■□□□□ 0.81
DDX54-208ENST00000551344 RUNX3Q13761 415 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 PDGFRLQ15198 375 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 ZNF77Q15935 545 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 SNX30Q5VWJ9 437 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 KIAA1958Q8N8K9 716 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 SCAMP5Q8TAC9 235 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 TMEM176AQ96HP8 235 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 HEXIM2Q96MH2 286 aaKnown RBP20.11■□□□□ 0.81
DDX54-208ENST00000551344 SRRTQ9BXP5 876 aaKnown RBP20.11■□□□□ 0.81
DDX54-208ENST00000551344 FBXO44Q9H4M3 255 aa20.11■□□□□ 0.81
DDX54-208ENST00000551344 CHORDC1Q9UHD1 332 aaPredicted RBP20.11■□□□□ 0.81
DDX54-208ENST00000551344 NDRG2Q9UN36 371 aaKnown RBP20.11■□□□□ 0.81
DDX54-208ENST00000551344 ZNF638Q14966 1978 aaKnown RBP20.1■□□□□ 0.81
DDX54-208ENST00000551344 OBSL1O75147 1896 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 OLFM2O95897 454 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 OAS1P00973 400 aaKnown RBP20.1■□□□□ 0.81
DDX54-208ENST00000551344 ADORA2BP29275 332 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 CTHP32929 405 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 MARSP56192 900 aaKnown RBP20.1■□□□□ 0.81
DDX54-208ENST00000551344 YWHAEP62258 255 aaKnown RBP20.1■□□□□ 0.81
DDX54-208ENST00000551344 AMPD2Q01433 879 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 CUL2Q13617 745 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 MTF1Q14872 753 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 ZNF394Q53GI3 561 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 MAMSTRQ6ZN01 415 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 RIN3Q8TB24 985 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 SH3RF2Q8TEC5 729 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 OSCP1Q8WVF1 389 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 RNF38Q9H0F5 515 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 CLSTN2Q9H4D0 955 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 LMAN1LQ9HAT1 526 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 PNPLA8Q9NP80 782 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 FAM86C1Q9NVL1 165 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 RWDD2AQ9UIY3 292 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 COL4A3Q01955 1670 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 TICRRQ7Z2Z1 1910 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 ANAPC1Q9H1A4 1944 aa20.1■□□□□ 0.81
DDX54-208ENST00000551344 CACNA1IQ9P0X4 2223 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 PROB1E7EW31 1015 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 TBXAS1P24557 533 aaPredicted RBP20.09■□□□□ 0.81
DDX54-208ENST00000551344 NBL1P41271 181 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 SOX9P48436 509 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 RAD23BP54727 409 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 USP4Q13107 963 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 CLEC20AQ6ZU45 233 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 ALYREFQ86V81 257 aaKnown RBP20.09■□□□□ 0.81
DDX54-208ENST00000551344 TRIM59Q8IWR1 403 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 SLC4A11Q8NBS3 891 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 TTC8Q8TAM2 541 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 PHOX2BQ99453 314 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 ARID3AQ99856 593 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 IER2Q9BTL4 223 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 DUSP16Q9BY84 665 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 EBF3Q9H4W6 596 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 HPS4Q9NQG7 708 aa20.09■□□□□ 0.81
DDX54-208ENST00000551344 SPATA6Q9NWH7 488 aaPredicted RBP20.09■□□□□ 0.81
DDX54-208ENST00000551344 DUS2Q9NX74 493 aaKnown RBP20.09■□□□□ 0.81
DDX54-208ENST00000551344 COL4A2P08572 1712 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 MIA3Q5JRA6 1907 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 LAMTOR5O43504 91 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 ZDHHC11BP0C7U3 371 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 CCDC192P0DO97 292 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 CHRNB1P11230 501 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 MRE11P49959 708 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 TUBP50607 506 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 HECTD3Q5T447 861 aa20.08■□□□□ 0.81
DDX54-208ENST00000551344 PPP1R26Q5T8A7 1209 aaPredicted RBP20.08■□□□□ 0.81
DDX54-208ENST00000551344 TRIM68Q6AZZ1 485 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms