RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 GPR20Q99678 358 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 DDX47Q9H0S4 455 aaKnown RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 CLCA2Q9UQC9 943 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 NCKAP1Q9Y2A7 1128 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 BDNFP23560 247 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CHRNA3P32297 505 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 RHOAP61586 193 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 ADCY2Q08462 1091 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 SMTNL2Q2TAL5 461 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PPP2R2DQ66LE6 453 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PPM1NQ8N819 430 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 DCLK3Q9C098 648 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CFAP69A5D8W1 941 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CBX4O00257 560 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 RASGRF2O14827 1237 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 STX7O15400 261 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PPP1R37O75864 691 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 TBX4P57082 545 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 FAM133BQ5BKY9 247 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 EDEM1Q92611 657 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 LACRTQ9GZZ8 138 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 SLC45A1Q9Y2W3 748 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CHUKO15111 745 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 TREHO43280 583 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 SMPD1P17405 629 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CAV1Q03135 178 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 GRIK3Q13003 919 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 TMA16Q96EY4 203 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 UBXN6Q9BZV1 441 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PTCH2Q9Y6C5 1203 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 TMEM247A6NEH6 219 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MEFVO15553 781 aaPredicted RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 APRTP07741 180 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MMEP08473 750 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 ACRP10323 421 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CCR1P32246 355 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MDH1P40925 334 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CCL14Q16627 93 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 IMPG1Q17R60 797 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 DSG4Q86SJ6 1040 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MAP4K3Q8IVH8 894 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 MFN1Q8IWA4 741 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 KRT35Q92764 455 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PAWRQ96IZ0 340 aaKnown RBP12.68□□□□□ -0.38
NR4A1-215ENST00000550557 TUBB6Q9BUF5 446 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 CRLS1Q9UJA2 301 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
NR4A1-215ENST00000550557 SERPIND1P05546 499 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 GEMIN4P57678 1058 aaKnown RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 HIBCHQ6NVY1 386 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ANGPTL8Q6UXH0 198 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ATP11CQ8NB49 1132 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 AIPL1Q9NZN9 384 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 LRP6O75581 1613 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CCDC78A2IDD5 438 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 FOXN3O00409 490 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 TXNDC9O14530 226 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 TSPAN3O60637 253 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 PAX3P23760 479 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 NUMBP49757 651 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ARSEP51690 589 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 PTENP60484 403 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 PTK2BQ14289 1009 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 FAM131BQ86XD5 332 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZIM3Q96PE6 472 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 FBXL5Q9UKA1 691 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 MAP2K7O14733 419 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 COL1A2P08123 1366 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CLTBP09497 229 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CSH1P0DML2 217 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 CSH2P0DML3 217 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 HDCP19113 662 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 MTA1Q13330 715 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 PTRHD1Q6GMV3 140 aaKnown RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 DCLRE1AQ6PJP8 1040 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 SLFN11Q7Z7L1 901 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 SLC2A14Q8TDB8 520 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ZNF384Q8TF68 577 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 SUSD6Q92537 303 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 MAF1Q9H063 256 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 RAB6BQ9NRW1 208 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ARHGAP20Q9P2F6 1191 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-215ENST00000550557 AKAP3O75969 853 aa12.67□□□□□ -0.38
NR4A1-215ENST00000550557 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms