RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 USP18Q9UMW8 372 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 VPS26AO75436 327 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 FXR1P51114 621 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CCNG1P51959 295 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 STX5Q13190 355 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 ANGPT1Q15389 498 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 SLFN11Q7Z7L1 901 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 LRRC6Q86X45 466 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 DNAJC9Q8WXX5 260 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 PRG3Q9Y2Y8 225 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CROCCQ5TZA2 2017 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 AP1G2O75843 785 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 FCGRTP55899 365 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CAMK2GQ13555 558 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 P3H2Q8IVL5 708 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CARD9Q9H257 536 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 BATF3Q9NR55 127 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 EGFRP00533 1210 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 NAMPTP43490 491 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 FAM180AQ6UWF9 173 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 OTOAQ7RTW8 1153 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 FGD2Q7Z6J4 655 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 TERB1Q8NA31 727 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 PTPRMP28827 1452 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 M0QYT0 321 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 STIP1P31948 543 aaKnown RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 PDLIM2Q96JY6 352 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 PON1P27169 355 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 NFKBIL1Q9UBC1 381 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 LZTS1Q9Y250 596 aa12.94□□□□□ -0.34
RAB3IP-212ENST00000550536 RASA1P20936 1047 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TARSP26639 723 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 ADGRF2Q8IZF7 708 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 LRRC71Q8N4P6 559 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 FBXO32Q969P5 355 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 THUMPD3Q9BV44 507 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 RPS6P62753 249 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 ANKS6Q68DC2 871 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 CHMP1BQ7LBR1 199 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 C10orf53Q8N6V4 93 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 C1orf131Q8NDD1 294 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 BHMTQ93088 406 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 ERGIC2Q96RQ1 377 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 USP1O94782 785 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 SERPINB5P36952 375 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 MAPK7Q13164 816 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 LUZP2Q86TE4 346 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 MAGEB18Q96M61 343 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 B2RBV5 119 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TMEM169Q96HH4 297 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TK2O00142 265 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 DARSP14868 501 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 KPNB1Q14974 876 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 VPS72Q15906 364 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 HERC6Q8IVU3 1022 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 UCMAQ8WVF2 138 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 EPB42P16452 691 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 MRPL48Q96GC5 212 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 STX7O15400 261 aaKnown RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 MTM1Q13496 603 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 CENPLQ8N0S6 344 aaPredicted RBP12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 TC2NQ8N9U0 490 aa12.93□□□□□ -0.34
RAB3IP-212ENST00000550536 CNTFP26441 200 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 HSD17B3P37058 310 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 RANBP1P43487 201 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 PEX5P50542 639 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 NCF4Q15080 339 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 C11orf74Q86VG3 221 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 RUSC1Q9BVN2 902 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 TARS2Q9BW92 718 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CLPBQ9H078 707 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CAMTA2O94983 1202 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 DAGLBQ8NCG7 672 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 IPPQ9Y573 584 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 AP4S1Q9Y587 144 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CYP2B6P20813 491 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 SRLQ86TD4 932 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CRTAMO95727 393 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 KRR1Q13601 381 aaKnown RBP12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
RAB3IP-212ENST00000550536 ANKRD13AQ8IZ07 590 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms