RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 RCOR2Q8IZ40 523 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 FAM213AQ9BRX8 229 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 YIPF2Q9BWQ6 316 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 PFDN4Q9NQP4 134 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
VDR-208ENST00000550325 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 CST8O60676 142 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 MAP3K6O95382 1288 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 CIITAP33076 1130 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 MAMLD1Q13495 774 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 C6orf52Q5T4I8 152 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 RNF111Q6ZNA4 994 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 NDUFAF2Q8N183 169 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DNAJC16Q9Y2G8 782 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TCRBV9S1A1TA0A576 114 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 POLR2MP0CAP2 368 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 FDFT1P37268 417 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 PSMD7P51665 324 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TBL3Q12788 808 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 OASLQ15646 514 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 C16orf46Q6P387 395 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 IGDCC3Q8IVU1 814 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DAW1Q8N136 415 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.61□□□□□ -0.39
VDR-208ENST00000550325 ARL10Q8N8L6 244 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 CPT1BQ92523 772 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 ZNF180Q9UJW8 692 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 PLA2G4CQ9UP65 541 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 F5H423 210 aaPredicted RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 P4HA2O15460 535 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DGKIO75912 1065 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TGDSO95455 350 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 TCN1P20061 433 aaPredicted RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 GNA15P30679 374 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 STIP1P31948 543 aaKnown RBP12.61□□□□□ -0.39
VDR-208ENST00000550325 RFX6Q8HWS3 928 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DCUN1D1Q96GG9 259 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 SH3GLB1Q9Y371 365 aa12.61□□□□□ -0.39
VDR-208ENST00000550325 AIM2O14862 343 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 STRNO43815 780 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 KRT37O76014 449 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 MRPS22P82650 360 aaKnown RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 CCNIQ14094 377 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 PSMD6Q15008 389 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 VWA5B1Q5TIE3 1220 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 COPS7BQ9H9Q2 264 aaPredicted RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 LAMB1P07942 1786 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 TRMUO75648 421 aaKnown RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 TMEM63AO94886 807 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 TFAP2AP05549 437 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 SHMT1P34896 483 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 RPL22P35268 128 aaKnown RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 SOX10P56693 466 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 METTL25Q8N6Q8 603 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 FEZF2Q8TBJ5 459 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 AP4B1Q9Y6B7 739 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 SLC26A4O43511 780 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 GRIN3BO60391 1043 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 APBA3O96018 575 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 HDAC4P56524 1084 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 GPSM2P81274 684 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 DNAJC24Q6P3W2 148 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 KLHL35Q6PF15 583 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
VDR-208ENST00000550325 TMEM8AQ9HCN3 771 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 XPNPEP1Q9NQW7 623 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 PCDHB2Q9Y5E7 798 aa12.6□□□□□ -0.39
VDR-208ENST00000550325 HNRNPDLO14979 420 aaKnown RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 UGT1A9O60656 530 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 ADRA2BP18089 450 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 KCNA4P22459 653 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 NAA20P61599 178 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 SP4Q02446 784 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 MOXD1Q6UVY6 613 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UGT2A3Q6UWM9 527 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 FAF2Q96CS3 445 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 CCT7Q99832 543 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms