RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 ABCD1P33897 745 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RTP1P59025 263 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RPL7AP62424 266 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 XIAPP98170 497 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 TAZQ16635 292 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 MTERF2Q49AM1 385 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZFYVE27Q5T4F4 411 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 IZUMO2Q6UXV1 221 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ACAD11Q709F0 780 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PANX3Q96QZ0 392 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ADAM33Q9BZ11 813 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 C12orf65Q9H3J6 166 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PDLIM7Q9NR12 457 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 SORCS3Q9UPU3 1222 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 KIAA1217Q5T5P2 1943 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 GOLGA8RI6L899 631 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 BUD23O43709 281 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 RGS20O76081 388 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 IFNB1P01574 187 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PSAPP07602 524 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PABPC4LP0CB38 370 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 KCNA2P16389 499 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 TBXAS1P24557 533 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PTK7Q13308 1070 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 LSAMPQ13449 338 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 HSF5Q4G112 596 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 ULK2Q8IYT8 1036 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 TTLL6Q8N841 843 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 B4GALNT2Q8NHY0 566 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 KCNN1Q92952 543 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 FAM111AQ96PZ2 611 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 MIS12Q9H081 205 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 WWP1Q9H0M0 922 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PNPLA8Q9NP80 782 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 MKS1Q9NXB0 559 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 AGO2Q9UKV8 859 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 FAM237BA0A1B0GVD1 139 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 SPECC1L-ADORA2AF8WAN1 911 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 GOLGA8SH3BPF8 625 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 H3BRJ5 948 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 GOLGA8MH3BSY2 632 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 UBTFL6P0CB48 400 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 RPL22P35268 128 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 PLCB3Q01970 1234 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 GAD2Q05329 585 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 CDC16Q13042 620 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 GRM2Q14416 872 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 RASIP1Q5U651 963 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 BBS12Q6ZW61 710 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 TREML1Q86YW5 311 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZBTB45Q96K62 511 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 CCDC106Q9BWC9 280 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 EPB41L1Q9H4G0 881 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 SLC7A8Q9UHI5 535 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 SSX2IPQ9Y2D8 614 aa13.33□□□□□ -0.28
CALCOCO1-217ENST00000549935 UTRNP46939 3433 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 STIP1P31948 543 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF132P52740 706 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ACTR2P61160 394 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ATG16L1Q676U5 607 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ST13P4Q8IZP2 240 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 TTC17Q96AE7 1141 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 TMEM143Q96AN5 459 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 NDNQ99608 321 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 KLF6Q99612 283 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 HAPLN2Q9GZV7 340 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 RBAKQ9NYW8 714 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 SIRPGQ9P1W8 387 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ARMCX1Q9P291 453 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 ZNF180Q9UJW8 692 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 STYXL1Q9Y6J8 313 aa13.32□□□□□ -0.28
CALCOCO1-217ENST00000549935 F8VP50 259 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms