RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PPP1R36Q96LQ0 422 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 PRMT7Q9NVM4 692 aaPredicted RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 GNEQ9Y223 722 aaKnown RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 NUB1Q9Y5A7 615 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 GBP1P32455 592 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 CLCN3P51790 818 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 YWHAGP61981 247 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MTFR1Q15390 333 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 CYP1B1Q16678 543 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 SPDYCQ5MJ68 293 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 RHBDF2Q6PJF5 856 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 NPNTQ6UXI9 565 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MCOLN2Q8IZK6 566 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 RBBP8NLQ8NC74 664 aaPredicted RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 CFAP36Q96G28 342 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 ATXN7L3BQ96GX2 97 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 CYTH2Q99418 400 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 OSBPL1AQ9BXW6 950 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC134Q9H6E4 229 aa11.61□□□□□ -0.55
LINC00661-204ENST00000549354 APOBEC3GQ9HC16 384 aaKnown RBP11.61□□□□□ -0.55
LINC00661-204ENST00000549354 A6NJR5 290 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 H3BRB1 525 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ADCY6O43306 1168 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 B4GALT4O60513 344 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TOP3BO95985 862 aaKnown RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 IQCF3P0C7M6 154 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ATF7IP2Q5U623 682 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 OLFML2BQ68BL8 750 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 IL31Q6EBC2 164 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 RFWD3Q6PCD5 774 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 LVRNQ6Q4G3 990 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CROCCP2Q86T23 111 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 SAPCD2Q86UD0 394 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 FAM71DQ8N9W8 422 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 SMC6Q96SB8 1091 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TBC1D10AQ9BXI6 508 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TUT1Q9H6E5 874 aaKnown RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 MINDY3Q9H8M7 445 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 IL1RAPL1Q9NZN1 696 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 UVRAGQ9P2Y5 699 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ADRA1DP25100 572 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 MYL6P60660 151 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 DGKDQ16760 1214 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CLEC16AQ2KHT3 1053 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TNFAIP8L3Q5GJ75 292 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 PPP6R3Q5H9R7 873 aaPredicted RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 SH3PXD2AQ5TCZ1 1133 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 FAM13CQ8NE31 585 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CPA4Q9UI42 421 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC189A1A4V9 331 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 SLC10A3P09131 477 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ZNF865P0CJ78 1059 aaPredicted RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TBXAS1P24557 533 aaPredicted RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 GDF10P55107 478 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 BPIFB4P59827 614 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TMEM62Q0P6H9 643 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CLUL1Q15846 466 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC6Q16204 474 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ANKRD22Q5VYY1 191 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 GBP7Q8N8V2 638 aaPredicted RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 CCDC89Q8N998 374 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 PRR11Q96HE9 360 aaPredicted RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 NAF1Q96HR8 494 aaKnown RBP11.6□□□□□ -0.55
LINC00661-204ENST00000549354 TMEM109Q9BVC6 243 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 PACSIN3Q9UKS6 424 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 Q9Y3F1 56 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 NUMBLQ9Y6R0 609 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ANK1P16157 1881 aa11.6□□□□□ -0.55
LINC00661-204ENST00000549354 ASS1P00966 412 aaKnown RBP11.59□□□□□ -0.55
LINC00661-204ENST00000549354 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 TUBP50607 506 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
LINC00661-204ENST00000549354 ATXN3P54252 364 aaPredicted RBP11.59□□□□□ -0.55
LINC00661-204ENST00000549354 TRPC3Q13507 836 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 RIPK1Q13546 671 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 CUL2Q13617 745 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 RGMBQ6NW40 437 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 PALM2Q8IXS6 379 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 OR6J1Q8NGC5 347 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 MAGEB5Q9BZ81 275 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 FBXO6Q9NRD1 293 aaPredicted RBP11.59□□□□□ -0.55
LINC00661-204ENST00000549354 PCDHB2Q9Y5E7 798 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 TCRBV7S3A2A0A539 114 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 RRN3P2A6NIE6 340 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 MCF2P10911 925 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 TNFAIP2Q03169 654 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 BMPR2Q13873 1038 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 PTK6Q13882 451 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 WDR72Q3MJ13 1102 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 DNAJC24Q6P3W2 148 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 LRRC6Q86X45 466 aa11.59□□□□□ -0.55
LINC00661-204ENST00000549354 SPNS2Q8IVW8 549 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms