RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 DDI1Q8WTU0 396 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.17□□□□□ -0.46
VDR-206ENST00000549336 SHC3Q92529 594 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 POPDC2Q9HBU9 364 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 PIGRP01833 764 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 MT-ND3P03897 115 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 RBP3P10745 1247 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 CYP2C18P33260 490 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DLG4P78352 724 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 SLC6A3Q01959 620 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 TAF1BQ53T94 588 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 VSTM1Q6UX27 236 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 GAS2L1Q99501 681 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 SAYSD1Q9NPB0 183 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DNAJC25-GNG10A0A024R161 153 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 BYSLQ13895 437 aaKnown RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 E4F1Q66K89 784 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 RUBCNQ92622 972 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 GSTA1P08263 222 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 GSTA2P09210 222 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 TROVE2P10155 538 aaKnown RBP eCLIP12.16□□□□□ -0.46
VDR-206ENST00000549336 ARSEP51690 589 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 GHRHRQ02643 423 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ZNF618Q5T7W0 954 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 GDF6Q6KF10 455 aaPredicted RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 TTC23LQ6PF05 361 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 PALB2Q86YC2 1186 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 LZTR1Q8N653 840 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 C3orf20Q8ND61 904 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 C1orf54Q8WWF1 131 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 CFAP36Q96G28 342 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 XPO6Q96QU8 1125 aaKnown RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 ARHGAP39Q9C0H5 1083 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 RRAGDQ9NQL2 400 aaPredicted RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 ADAM28Q9UKQ2 775 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 MYH1P12882 1939 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 RNF40O75150 1001 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 PHF2O75151 1096 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 GMNNO75496 209 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ATP5C1P36542 298 aaKnown RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 UHMK1Q8TAS1 419 aaKnown RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ARHGAP20Q9P2F6 1191 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 CAPN15O75808 1086 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ANXA9O76027 345 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
VDR-206ENST00000549336 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 KRT33BQ14525 404 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 RETSATQ6NUM9 610 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 ZSWIM1Q9BR11 485 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 OGFRQ9NZT2 677 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 SLC25A13Q9UJS0 675 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 SIK3Q9Y2K2 1263 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 INSL6Q9Y581 213 aa12.16□□□□□ -0.46
VDR-206ENST00000549336 HECTD3Q5T447 861 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 USP18Q9UMW8 372 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 CYBAP13498 195 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 NOS2P35228 1153 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 SNX27Q96L92 541 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 ZMYND8Q9ULU4 1186 aaPredicted RBP12.15□□□□□ -0.46
VDR-206ENST00000549336 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
VDR-206ENST00000549336 LRP5O75197 1615 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 EBAG9O00559 213 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 RASGRF2O14827 1237 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
VDR-206ENST00000549336 ZNF865P0CJ78 1059 aaPredicted RBP12.15□□□□□ -0.46
VDR-206ENST00000549336 C11orf63Q6NUN7 778 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 FAM131BQ86XD5 332 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 ECHDC2Q86YB7 292 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 CINPQ9BW66 212 aaPredicted RBP12.15□□□□□ -0.46
VDR-206ENST00000549336 KLHL11Q9NVR0 708 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 NAV1Q8NEY1 1877 aa12.15□□□□□ -0.46
VDR-206ENST00000549336 TRAV19A0A0A6YYK7 116 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 CNMDO75829 334 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 RHOCP08134 193 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 TYMPP19971 482 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 CDC25CP30307 473 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 ADCY2Q08462 1091 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 SMTNL2Q2TAL5 461 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 IZUMO3Q5VZ72 239 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 ALS2CLQ60I27 953 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 NAPEPLDQ6IQ20 393 aa12.15□□□□□ -0.47
VDR-206ENST00000549336 EPM2AIP1Q7L775 607 aaPredicted RBP12.15□□□□□ -0.47
VDR-206ENST00000549336 ANKRD42Q8N9B4 389 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms