RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SLITRK1Q96PX8 696 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SYT11Q9BT88 431 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 MRPL47Q9HD33 250 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 TMLHEQ9NVH6 421 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ARHGAP20Q9P2F6 1191 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 MTCH2Q9Y6C9 303 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SCINQ9Y6U3 715 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 GREB1Q4ZG55 1949 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ZNF638Q14966 1978 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 NCANO14594 1321 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 F8VP50 259 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ADAM12O43184 909 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 HCRTO43612 131 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 SKILP12757 684 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 UNGP13051 313 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 IGFBP4P22692 258 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 CDC25CP30307 473 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 GABRB2P47870 512 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 RPL34P49207 117 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ITIH3Q06033 890 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 PDCLQ13371 301 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 TCEAL5Q5H9L2 206 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 RAB41Q5JT25 222 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 CES5AQ6NT32 575 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 PAQR9Q6ZVX9 377 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 TMEM110Q86TL2 294 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 PIGZQ86VD9 579 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 STKLD1Q8NE28 680 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 CTNNBL1Q8WYA6 563 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 C18orf8Q96DM3 657 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 PABPC5Q96DU9 382 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 SMOQ99835 787 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 NCAPGQ9BPX3 1015 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC4A5Q9BY07 1137 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ASAH2Q9NR71 780 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ST7Q9NRC1 585 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ASNSD1Q9NWL6 643 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 RRN3Q9NYV6 651 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 ADAMTS1Q9UHI8 967 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 NAGPAQ9UK23 515 aa10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 EPN1Q9Y6I3 576 aaPredicted RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 PRRC2BQ5JSZ5 2229 aaKnown RBP10.29□□□□□ -0.76
SMARCD1-206ENST00000549274 MYO16Q9Y6X6 1858 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 SOX1O00570 391 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 CSPG5O95196 566 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 NDUFA10O95299 355 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 LCA5LO95447 670 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 H2AFZP0C0S5 128 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 FOSL2P15408 326 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 PTPN2P17706 415 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 CHRNB2P17787 502 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 MMP8P22894 467 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 DDX6P26196 483 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 YWHAQP27348 245 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC5A3P53794 718 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 TWF1Q12792 350 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 HYAL1Q12794 435 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 ZNF268Q14587 947 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 IFI16Q16666 785 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 HS1BP3Q53T59 392 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 EFHC1Q5JVL4 640 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 CYP4A22Q5TCH4 519 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 NAA35Q5VZE5 725 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 E4F1Q66K89 784 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 H2AFVQ71UI9 128 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 BEND5Q7L4P6 421 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 ARCQ7LC44 396 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 RBM23Q86U06 439 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 MON1AQ86VX9 555 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 PASD1Q8IV76 773 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC30A5Q8TAD4 765 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 UBA3Q8TBC4 463 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC20A1Q8WUM9 679 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 UBE2Q2Q8WVN8 375 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 MYRFLQ96LU7 910 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 RIPOR3Q96MK2 946 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 TSGA10Q9BZW7 698 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 PIDD1Q9HB75 910 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 TLR8Q9NR97 1041 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 OLA1Q9NTK5 396 aaKnown RBP10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 ADAM22Q9P0K1 906 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 SCML2Q9UQR0 700 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 FAM50BQ9Y247 325 aa10.28□□□□□ -0.76
SMARCD1-206ENST00000549274 FAM92AA1XBS5 289 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 SLC38A8A6NNN8 435 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 RFXAPO00287 272 aa10.27□□□□□ -0.77
SMARCD1-206ENST00000549274 DDX3XO00571 662 aaKnown RBP eCLIP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms