RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 LIN9Q5TKA1 542 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 PPP1R2P3Q6NXS1 205 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 CLEC20AQ6ZU45 233 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 SLFN11Q7Z7L1 901 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 ERICH1Q86X53 443 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 HERC6Q8IVU3 1022 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 TRIM58Q8NG06 486 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 MYCBPAPQ8TBZ2 947 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 TRIM11Q96F44 468 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 PIWIL1Q96J94 861 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 NOX5Q96PH1 765 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 SMOQ99835 787 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 DUSP16Q9BY84 665 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 ZCWPW1Q9H0M4 648 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 KRT82Q9NSB4 513 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 CTTNBP2NLQ9P2B4 639 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 UVRAGQ9P2Y5 699 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 HESX1Q9UBX0 185 aa8.54□□□□□ -1.04
DEPDC4-207ENST00000549249 LCHNA4D1U4 455 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 HHLA1C9JL84 531 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PIK3R2O00459 728 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ENC1O14682 589 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 NCK2O43639 380 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 AP1G2O75843 785 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ARHGEF15O94989 841 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 VNN2O95498 520 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 FTCDO95954 541 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TUBB4AP04350 444 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ATP1A1P05023 1023 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM200BP0CF97 657 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 NPR3P17342 541 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 CASQ1P31415 396 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PLA2G4AP47712 749 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ALDH7A1P49419 539 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 NAP1L1P55209 391 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 AMPD2Q01433 879 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 OGDHQ02218 1023 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF252P-AS1Q0IIN9 211 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ELAVL2Q12926 359 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PTPROQ16827 1216 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 CTXN3Q4LDR2 81 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 DNTTIP2Q5QJE6 756 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 C9orf50Q5SZB4 431 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 SPOUT1Q5T280 376 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM109BQ6ICB4 259 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ZNF280DQ6N043 979 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TRNP1Q6NT89 227 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PRSS55Q6UWB4 352 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 FAM183BPQ6ZVS7 135 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 GPRIN1Q7Z2K8 1008 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM110Q86TL2 294 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 NT5DC3Q86UY8 548 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PIGZQ86VD9 579 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 THEM5Q8N1Q8 247 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TTC9BQ8N6N2 239 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 CLEC4CQ8WTT0 213 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 C18orf8Q96DM3 657 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 MCRS1Q96EZ8 462 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC9A7Q96T83 725 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 NAPGQ99747 312 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 MED10Q9BTT4 135 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TTPALQ9BTX7 342 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 HERC2P3Q9BVR0 1158 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TLR10Q9BXR5 811 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ABCB6Q9NP58 842 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 MTMR10Q9NXD2 777 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 ANAPC7Q9UJX3 599 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 SLC4A7Q9Y6M7 1214 aa8.53□□□□□ -1.04
DEPDC4-207ENST00000549249 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 OR6C75A6NL08 312 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 TMEM110-MUSTN1A8MSY1 372 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 GOLGA8SH3BPF8 625 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ADAM12O43184 909 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 PAPSS1O43252 624 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SOD2P04179 222 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ATP2A2P16615 1042 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 NDUFV2P19404 249 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 BDNFP23560 247 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MAP3K7CLP57077 242 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 RPL7AP62424 266 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 TSPY1Q01534 308 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ADCY1Q08828 1119 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MESDQ14696 234 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SLC39A12Q504Y0 691 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ZNF697Q5TEC3 545 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 C11orf63Q6NUN7 778 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms