RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 LTB4R2Q9NPC1 389 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 GKN1Q9NS71 199 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 THG1LQ9NWX6 298 aaKnown RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 SMPD4Q9NXE4 827 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 OBP2AQ9NY56 170 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 EHD2Q9NZN4 543 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 GMIPQ9P107 970 aa16.71■□□□□ 0.27
DDX54-205ENST00000548786 CHORDC1Q9UHD1 332 aaPredicted RBP16.71■□□□□ 0.27
DDX54-205ENST00000548786 SHISA7A6NL88 538 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 GOLGA6L22H0YM25 854 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 TNFRSF10BO14763 440 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
DDX54-205ENST00000548786 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
DDX54-205ENST00000548786 GNA14O95837 355 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
DDX54-205ENST00000548786 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 ARSAP15289 507 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 WEE1P30291 646 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 CLEC20AQ6ZU45 233 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 PPM1KQ8N3J5 372 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 TMEM176AQ96HP8 235 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 CEP295NLQ96MC4 621 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 NT5C1BQ96P26 610 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
DDX54-205ENST00000548786 EBF3Q9H4W6 596 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 GCNT4Q9P109 453 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 MIA3Q5JRA6 1907 aa16.7■□□□□ 0.26
DDX54-205ENST00000548786 KIF26AQ9ULI4 1882 aaPredicted RBP16.69■□□□□ 0.26
DDX54-205ENST00000548786 MYO16Q9Y6X6 1858 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CALCAP01258 141 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CD19P15391 556 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 PLA2G5P39877 138 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 PGFP49763 221 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 PTPN5P54829 565 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 NHLH1Q02575 133 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CETN1Q12798 172 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 MTF1Q14872 753 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
DDX54-205ENST00000548786 RRAGAQ7L523 313 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 ARHGEF19Q8IW93 802 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 FAM3CQ92520 227 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 PHOX2BQ99453 314 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 DNAI2Q9GZS0 605 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 RNF38Q9H0F5 515 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 INTS2Q9H0H0 1204 aaKnown RBP16.69■□□□□ 0.26
DDX54-205ENST00000548786 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CCSER2Q9H7U1 834 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
DDX54-205ENST00000548786 CYP26A1O43174 497 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 MBL2P11226 248 aaPredicted RBP16.68■□□□□ 0.26
DDX54-205ENST00000548786 ACO1P21399 889 aaKnown RBP16.68■□□□□ 0.26
DDX54-205ENST00000548786 MTIF2P46199 727 aaKnown RBP16.68■□□□□ 0.26
DDX54-205ENST00000548786 USP4Q13107 963 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 ZNF77Q15935 545 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 GOLGA7BQ2TAP0 167 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 TXNDC11Q6PKC3 985 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 ATOH1Q92858 354 aaPredicted RBP16.68■□□□□ 0.26
DDX54-205ENST00000548786 CRACR2AQ9BSW2 395 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 CSNK1G1Q9HCP0 422 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 HPS4Q9NQG7 708 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 PCDHB4Q9Y5E5 795 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 CPQQ9Y646 472 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 HELZP42694 1942 aaKnown RBP16.68■□□□□ 0.26
DDX54-205ENST00000548786 PATJQ8NI35 1801 aa16.68■□□□□ 0.26
DDX54-205ENST00000548786 OTOL1A6NHN0 477 aaPredicted RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 HHLA1C9JL84 531 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 MAN2B1O00754 1011 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 COCHO43405 550 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 TBXAS1P24557 533 aaPredicted RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 MARSP56192 900 aaKnown RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 YWHAEP62258 255 aaKnown RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 ZXDBP98169 803 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 PLCB2Q00722 1185 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 ZNF268Q14587 947 aaPredicted RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 ANGPT1Q15389 498 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 ITPRIPL2Q3MIP1 535 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 TMEM270Q6UE05 265 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 IRF2BP1Q8IU81 584 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 PDZD8Q8NEN9 1154 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 LMO3Q8TAP4 145 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 FAXDC2Q96IV6 333 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 PRRX2Q99811 253 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 TRPV5Q9NQA5 729 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 SPATA6Q9NWH7 488 aaPredicted RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 DUS2Q9NX74 493 aaKnown RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 ARHGAP26Q9UNA1 814 aa16.67■□□□□ 0.26
DDX54-205ENST00000548786 MRPS17Q9Y2R5 130 aaKnown RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
DDX54-205ENST00000548786 F5P12259 2224 aa16.66■□□□□ 0.26
DDX54-205ENST00000548786 SOBPA7XYQ1 873 aa16.66■□□□□ 0.26
DDX54-205ENST00000548786 LEFTY2O00292 366 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms