RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ZNF813Q6ZN06 617 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 MICU3Q86XE3 530 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 SFTPA1Q8IWL2 248 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 BPIFB1Q8TDL5 484 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 PPP2R3CQ969Q6 453 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 C17orf80Q9BSJ5 609 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 TRIM5Q9C035 493 aa5□□□□□ -1.61
CCDC38-206ENST00000548771 TRMT13Q9NUP7 481 aaKnown RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 TUBA8Q9NY65 449 aaPredicted RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 DNMT3BQ9UBC3 853 aaKnown RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 RGS17Q9UGC6 210 aaPredicted RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 SCAF8Q9UPN6 1271 aaKnown RBP5□□□□□ -1.61
CCDC38-206ENST00000548771 A0A1W2PPL8 197 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 ANKRD62A6NC57 917 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 AP4M1O00189 453 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 PHGDHO43175 533 aaKnown RBP4.99□□□□□ -1.61
CCDC38-206ENST00000548771 EXOC3O60645 756 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 PMPCBO75439 489 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 GKP32189 559 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 BCAT1P54687 386 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 SLC13A2Q13183 592 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 LAMB3Q13751 1172 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 ZDHHC24Q6UX98 284 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 DPY19L3Q6ZPD9 716 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 MAEAQ7L5Y9 396 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 KIAA0319LQ8IZA0 1049 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 LINC01465Q8N7H1 131 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 ZBTB34Q8NCN2 500 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.99□□□□□ -1.61
CCDC38-206ENST00000548771 TMEM171Q8WVE6 324 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 RUNDC1Q96C34 613 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 COQ8BQ96D53 544 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 C22orf23Q9BZE7 217 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 CIPCQ9C0C6 399 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 MS4A7Q9GZW8 240 aaPredicted RBP4.99□□□□□ -1.61
CCDC38-206ENST00000548771 VPS16Q9H269 839 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 GBA2Q9HCG7 927 aaPredicted RBP4.99□□□□□ -1.61
CCDC38-206ENST00000548771 GAR1Q9NY12 217 aaKnown RBP4.99□□□□□ -1.61
CCDC38-206ENST00000548771 TBC1D30Q9Y2I9 924 aa4.99□□□□□ -1.61
CCDC38-206ENST00000548771 USP19O94966 1318 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 KCNU1A8MYU2 1149 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 TBX3O15119 743 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 CT47B1P0C2W7 299 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-206ENST00000548771 ATP5F1P24539 256 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-206ENST00000548771 ALDH5A1P51649 535 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-206ENST00000548771 CCNIQ14094 377 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 GPR162Q16538 588 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 CERCAMQ5T4B2 595 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 ADAMTS18Q8TE60 1221 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 DPCDQ9BVM2 203 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-206ENST00000548771 B3GNT5Q9BYG0 378 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 ZNF518BQ9C0D4 1074 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 TMEM60Q9H2L4 133 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 ELOVL5Q9NYP7 299 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 CCNL1Q9UK58 526 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-206ENST00000548771 AMFRQ9UKV5 643 aa4.98□□□□□ -1.61
CCDC38-206ENST00000548771 BTBD19C9JJ37 291 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 M0R3H8 397 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 TBC1D4O60343 1298 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 USP1O94782 785 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 NTN1O95631 604 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 A1BGP04217 495 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 ATF7P17544 494 aaPredicted RBP4.97□□□□□ -1.61
CCDC38-206ENST00000548771 ARHGAP25P42331 645 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 EPHB1P54762 984 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 FOXG1P55316 489 aaPredicted RBP4.97□□□□□ -1.61
CCDC38-206ENST00000548771 TIAL1Q01085 375 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC38-206ENST00000548771 RAB32Q13637 225 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 FAM187BQ17R55 369 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 DCAF12L1Q5VU92 463 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 SIRT6Q8N6T7 355 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 OR56A3Q8NH54 315 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 PNISRQ8TF01 805 aaKnown RBP4.97□□□□□ -1.61
CCDC38-206ENST00000548771 LRGUKQ96M69 825 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 BRIP1Q9BX63 1249 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 A1CFQ9NQ94 594 aaKnown RBP4.97□□□□□ -1.61
CCDC38-206ENST00000548771 STK32BQ9NY57 414 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 L1RE1Q9UN81 338 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 CDY1Q9Y6F8 540 aa4.97□□□□□ -1.61
CCDC38-206ENST00000548771 UBE2Q2LH0YL09 131 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 H3BNC9 293 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 BMP15O95972 392 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 IL1R2P27930 398 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 MMP13P45452 471 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 PRKAG1P54619 331 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 TIRAPP58753 221 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 LMAN2Q12907 356 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 NPY5RQ15761 445 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 CERKLQ49MI3 558 aaPredicted RBP4.96□□□□□ -1.62
CCDC38-206ENST00000548771 Q4G0T1 1027 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 AWAT2Q6E213 333 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 MIS18BP1Q6P0N0 1132 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 PIGOQ8TEQ8 1089 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
CCDC38-206ENST00000548771 SUCLG2Q96I99 432 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 MMS19Q96T76 1030 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 ZIM2Q9NZV7 527 aa4.96□□□□□ -1.62
CCDC38-206ENST00000548771 KLHL13Q9P2N7 655 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms