RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 STIM1Q13586 685 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 CCINQ13939 588 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 PON2Q15165 354 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 ZNF77Q15935 545 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 FBXO43Q4G163 708 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 TXNDC11Q6PKC3 985 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
BEST3-209ENST00000548658 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 RUBCNQ92622 972 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 SECISBP2LQ93073 1101 aaKnown RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 FBXO44Q9H4M3 255 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 FAM124BQ9H5Z6 455 aaPredicted RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 TMEM8AQ9HCN3 771 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 DMAP1Q9NPF5 467 aaPredicted RBP12.09□□□□□ -0.47
BEST3-209ENST00000548658 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
BEST3-209ENST00000548658 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 PTPRDP23468 1912 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 CLDN5O00501 218 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 LILRB5O75023 590 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 NFATC1O95644 943 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 OLFM2O95897 454 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 DRD1P21728 446 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 CNR2P34972 360 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 PRCPP42785 496 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 ASPAP45381 313 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 NDST1P52848 882 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 PPP3CAQ08209 521 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 USP4Q13107 963 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 TMEM196Q5HYL7 178 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 SNX30Q5VWJ9 437 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 TRIM68Q6AZZ1 485 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 SCARA5Q6ZMJ2 495 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 ACOT1Q86TX2 421 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 FAM35AQ86V20 835 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 FUKQ8N0W3 1084 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 TTC16Q8NEE8 873 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 SPATA20Q8TB22 786 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 KCNK16Q96T55 309 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 ECT2Q9H8V3 914 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 PCDHA5Q9Y5H7 936 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 VPS13AQ96RL7 3174 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 PATJQ8NI35 1801 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 FAM186AA6NE01 2351 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 MYO15AQ9UKN7 3530 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 OBSL1O75147 1896 aa12.08□□□□□ -0.48
BEST3-209ENST00000548658 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 PSMA7O14818 248 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 SLC16A3O15427 465 aaKnown RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 AP1G2O75843 785 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 OAS1P00973 400 aaKnown RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 HOXA6P31267 233 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 GJA4P35212 333 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 TUBP50607 506 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 CACNA2D1P54289 1103 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 EML3Q32P44 896 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 PAQR9Q6ZVX9 377 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 SMYD4Q8IYR2 804 aaPredicted RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 GPR161Q8N6U8 529 aaKnown RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 FBXO32Q969P5 355 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 HNRNPABQ99729 332 aaKnown RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 P2RY13Q9BPV8 354 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 SDCBP2Q9H190 292 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 CSNK1G1Q9HCP0 422 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 KRT82Q9NSB4 513 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 RBM12Q9NTZ6 932 aaKnown RBP12.07□□□□□ -0.48
BEST3-209ENST00000548658 IL37Q9NZH6 218 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 TBC1D14Q9P2M4 693 aa12.07□□□□□ -0.48
BEST3-209ENST00000548658 ANAPC1Q9H1A4 1944 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 FAM92AA1XBS5 289 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 OTOL1A6NHN0 477 aaPredicted RBP12.06□□□□□ -0.48
BEST3-209ENST00000548658 LEFTY2O00292 366 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 TNFRSF10BO14763 440 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 TDGF1P13385 188 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 ARSAP15289 507 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 MXI1P50539 228 aa12.06□□□□□ -0.48
BEST3-209ENST00000548658 GALK1P51570 392 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms