RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 UBR7Q8N806 425 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 PRSS3P2Q8NHM4 247 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 CCHCR1Q8TD31 782 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 ADAMTS15Q8TE58 950 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 RFKQ969G6 155 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 FKBP10Q96AY3 582 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 TLR10Q9BXR5 811 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 PACSIN1Q9BY11 444 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 QRSL1Q9H0R6 528 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 CAAP1Q9H8G2 361 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 JKAMPQ9P055 326 aa3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 MYBBP1AQ9BQG0 1328 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-204ENST00000547823 TRPM7Q96QT4 1865 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 COL6A3P12111 3177 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 PRRT4C9JH25 899 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 MMP10P09238 476 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 VIL1P09327 827 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 GSPT1P15170 499 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 KCNA3P22001 575 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 SCP2P22307 547 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 MT3P25713 68 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 SOX5P35711 763 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 STRN3Q13033 797 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 DEFB115Q30KQ5 88 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 CEP78Q5JTW2 689 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 ZNF618Q5T7W0 954 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 EGFLAMQ63HQ2 1017 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 DDX46Q7L014 1031 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 TMPRSS9Q7Z410 1059 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 WDR53Q7Z5U6 358 aaPredicted RBP3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 AFAP1L2Q8N4X5 818 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 CLRN3Q8NCR9 226 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 CHAC2Q8WUX2 184 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 TTC1Q99614 292 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 SMOQ99835 787 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 C7orf25Q9BPX7 421 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 QTRT1Q9BXR0 403 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 SH3BP4Q9P0V3 963 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 C4AP0C0L4 1744 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 SCN4AP35499 1836 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 ANKRD36BQ8N2N9 1353 aa3.12□□□□□ -1.91
DEPDC4-204ENST00000547823 CCDC187A0A096LP49 1063 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 GOLGA8AA7E2F4 631 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 TISP43B9A030 160 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 CA12O43570 354 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 DNAJB5O75953 348 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 EYA4O95677 639 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 AMY1AP04745 511 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM163BP0C2L3 166 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 TMEM191BP0C7N4 346 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 ALDH9A1P49189 494 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 ZNF134P52741 427 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 SEPT2Q15019 361 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 UTP14CQ5TAP6 766 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 TAPT1Q6NXT6 567 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 SLC2A7Q6PXP3 512 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 CATSPERGQ6ZRH7 1159 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 ZNF365Q70YC5 407 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 KRT26Q7Z3Y9 468 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 CFAP52Q8N1V2 620 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 FANCBQ8NB91 859 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 IL17RDQ8NFM7 739 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 LMBR1Q8WVP7 490 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 REPS1Q96D71 796 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 TPSD1Q9BZJ3 242 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 DMRT3Q9NQL9 472 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 ARHGEF3Q9NR81 526 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 MTMR4Q9NYA4 1195 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 ITGB4P16144 1822 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 USP47Q96K76 1375 aa3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 KIAA0100Q14667 2235 aaKnown RBP3.11□□□□□ -1.91
DEPDC4-204ENST00000547823 NSD3Q9BZ95 1437 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 LTN1O94822 1766 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 DLEC1Q9Y238 1755 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 MAP2P11137 1827 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 ADGRB1O14514 1584 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 KCNU1A8MYU2 1149 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 VWC2LB2RUY7 222 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 ADAMTS3O15072 1205 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 GRM6O15303 877 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 FGBP02675 491 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 HMGB2P26583 209 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 RABEP1Q15276 862 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 DLK2Q6UY11 383 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 LHFPL2Q6ZUX7 228 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 MEPCEQ7L2J0 689 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 ZGPATQ8N5A5 531 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 LYZL4Q96KX0 146 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 KLHL32Q96NJ5 620 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 PUS7Q96PZ0 661 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 TRIB1Q96RU8 372 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 SPRTNQ9H040 489 aaPredicted RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 SAP30BPQ9UHR5 308 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 SH2B3Q9UQQ2 575 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 AFG3L2Q9Y4W6 797 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 MKI67P46013 3256 aaKnown RBP3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 PKD1L2Q7Z442 2459 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 ADAMTSL1Q8N6G6 1762 aa3.1□□□□□ -1.91
DEPDC4-204ENST00000547823 FER1L6Q2WGJ9 1857 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms