RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CEP104O60308 925 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 PDE6CP51160 858 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 UBL4BQ8N7F7 174 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 CCDC127Q96BQ5 260 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 FAM212AQ96EL1 285 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 TRIM11Q96F44 468 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 MS4A14Q96JA4 679 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 RIPOR3Q96MK2 946 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 TSPAN18Q96SJ8 248 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 PSMB7Q99436 277 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 RHOBTB2Q9BYZ6 727 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 PLEKHA4Q9H4M7 779 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 CDY1Q9Y6F8 540 aa18.25■□□□□ 0.51
RBFOX1-207ENST00000547338 CCDC195A0A1B0GUA6 201 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 M0QZQ0 153 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 SYN3O14994 580 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 DCXO43602 365 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 OPA1O60313 960 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 LRRN2O75325 713 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 POU5F1Q01860 360 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 TMEM132DQ14C87 1099 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 ATAT1Q5SQI0 421 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 ANKS3Q6ZW76 656 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 CD302Q8IX05 232 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 MREGQ8N565 214 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 KREMEN1Q96MU8 473 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 FAM213AQ9BRX8 229 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 ASB7Q9H672 318 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 SEPT11Q9NVA2 429 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 DERAQ9Y315 318 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 C2CD2Q9Y426 696 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 DOCK8Q8NF50 2099 aa18.24■□□□□ 0.51
RBFOX1-207ENST00000547338 FAM86C2PA6NEL3 165 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 PIRO00625 290 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 ZMYND10O75800 440 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 CYP1A2P05177 515 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 MYBL1P10243 752 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 CYP11B1P15538 503 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 ZACNQ401N2 412 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 C9orf57Q5W0N0 161 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 SLC8B1Q6J4K2 584 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 BRSK2Q8IWQ3 736 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 SEMA4DQ92854 862 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 GTF3C4Q9UKN8 822 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 NUB1Q9Y5A7 615 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 NOTCH4Q99466 2003 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 MYO10Q9HD67 2058 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 WDR27A2RRH5 827 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 BHMG1C9JSJ3 638 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 HEXIM1O94992 359 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 C4BPAP04003 597 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 TBXAS1P24557 533 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 ROR1Q01973 937 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 ACAD10Q6JQN1 1059 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 CXorf38Q8TB03 319 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 RUNDC3BQ96NL0 473 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 KRT12Q99456 494 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 PRKD2Q9BZL6 878 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 THAP2Q9H0W7 228 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 ZDHHC7Q9NXF8 308 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
RBFOX1-207ENST00000547338 GOLGA6L10A0A0M3HER8 536 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 A6NNZ2 444 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 KRIT1O00522 736 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 ABLIM3O94929 683 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 CHRNB2P17787 502 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 USP8P40818 1118 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 LILRA4P59901 499 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 TUBB8Q3ZCM7 444 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 NOP9Q86U38 636 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 TAS1R2Q8TE23 839 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 SMG7Q92540 1137 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 EPB41L5Q9HCM4 733 aa18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 PACSIN2Q9UNF0 486 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 TIMM13Q9Y5L4 95 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-207ENST00000547338 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 H3BQF6 201 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 POLR3GO15318 223 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 DDX3YO15523 660 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 CYP26A1O43174 497 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 GPR37L1O60883 481 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 VNN2O95498 520 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 C8AP07357 584 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 DLATP10515 647 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 ABCB4P21439 1286 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 FMO1Q01740 532 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 ZNF771Q7L3S4 317 aaPredicted RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 C1orf131Q8NDD1 294 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 CGRRF1Q99675 332 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 LRFN3Q9BTN0 628 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 C1QTNF1Q9BXJ1 281 aa18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 WDR6Q9NNW5 1121 aaKnown RBP18.21■□□□□ 0.51
RBFOX1-207ENST00000547338 AVENQ9NQS1 362 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms