RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TNFRSF10BO14763 440 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 NCAM2O15394 837 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 TBXAS1P24557 533 aaPredicted RBP16.84■□□□□ 0.29
DDX54-204ENST00000546898 SLC5A3P53794 718 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 TAF10Q12962 218 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 USP4Q13107 963 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 CUL2Q13617 745 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 TRIM59Q8IWR1 403 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 ZMIZ2Q8NF64 920 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 CYFIP2Q96F07 1278 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
DDX54-204ENST00000546898 KCNK16Q96T55 309 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 SMOQ99835 787 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 SRRTQ9BXP5 876 aaKnown RBP16.84■□□□□ 0.29
DDX54-204ENST00000546898 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 LMBRD1Q9NUN5 540 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 IL37Q9NZH6 218 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 ARHGAP26Q9UNA1 814 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 CCL26Q9Y258 94 aa16.84■□□□□ 0.29
DDX54-204ENST00000546898 C2orf78A6NCI8 922 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 ZNF840PA6NDX5 716 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 SHISA7A6NL88 538 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 OLFM2O95897 454 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 DCNP07585 359 aaKnown RBP16.83■□□□□ 0.28
DDX54-204ENST00000546898 HDCP19113 662 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 TARSP26639 723 aaKnown RBP16.83■□□□□ 0.28
DDX54-204ENST00000546898 ADORA2BP29275 332 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 IFRD2Q12894 506 aaPredicted RBP16.83■□□□□ 0.28
DDX54-204ENST00000546898 ZNF77Q15935 545 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 WDFY4Q6ZS81 3184 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 CLEC20AQ6ZU45 233 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 ALYREFQ86V81 257 aaKnown RBP16.83■□□□□ 0.28
DDX54-204ENST00000546898 ARL14EPQ8N8R7 260 aaPredicted RBP16.83■□□□□ 0.28
DDX54-204ENST00000546898 TATDN2Q93075 761 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 FBXO32Q969P5 355 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 SLC22A12Q96S37 553 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 ARID3AQ99856 593 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 FBXO44Q9H4M3 255 aa16.83■□□□□ 0.28
DDX54-204ENST00000546898 FAM170BA6NMN3 283 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 OAS1P00973 400 aaKnown RBP16.82■□□□□ 0.28
DDX54-204ENST00000546898 CD72P21854 359 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 RPS9P46781 194 aaKnown RBP16.82■□□□□ 0.28
DDX54-204ENST00000546898 KPNA1P52294 538 aaPredicted RBP16.82■□□□□ 0.28
DDX54-204ENST00000546898 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 MTF1Q14872 753 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 PDGFRLQ15198 375 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
DDX54-204ENST00000546898 RALGPS2Q86X27 583 aaPredicted RBP16.82■□□□□ 0.28
DDX54-204ENST00000546898 KIAA1958Q8N8K9 716 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 SLC4A11Q8NBS3 891 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 FAM3CQ92520 227 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 CLDN23Q96B33 292 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 ZFYVE19Q96K21 471 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 NT5C1BQ96P26 610 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 CYP2S1Q96SQ9 504 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 FAM83CQ9BQN1 747 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
DDX54-204ENST00000546898 CACNA1IQ9P0X4 2223 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 FANCMQ8IYD8 2048 aa16.82■□□□□ 0.28
DDX54-204ENST00000546898 BEST1O76090 585 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 AFPP02771 609 aaKnown RBP16.81■□□□□ 0.28
DDX54-204ENST00000546898 TUBP50607 506 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 RAD23BP54727 409 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 SLC7A9P82251 487 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 KCNH2Q12809 1159 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 ITPRIPL2Q3MIP1 535 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 ZNF394Q53GI3 561 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 PPP1R26Q5T8A7 1209 aaPredicted RBP16.81■□□□□ 0.28
DDX54-204ENST00000546898 ARHGAP17Q68EM7 881 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 UBR7Q8N806 425 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 SCAMP5Q8TAC9 235 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 RIN3Q8TB24 985 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
DDX54-204ENST00000546898 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 GKN1Q9NS71 199 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 GTSE1Q9NYZ3 720 aa16.81■□□□□ 0.28
DDX54-204ENST00000546898 MTF2Q9Y483 593 aaPredicted RBP16.81■□□□□ 0.28
DDX54-204ENST00000546898 SPECC1L-ADORA2AF8WAN1 911 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 H0Y858 1186 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 ABL1P00519 1130 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 ZDHHC11BP0C7U3 371 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 CTHP32929 405 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 LRMPQ12912 555 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 ANGPT1Q15389 498 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 DDX42Q86XP3 938 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX54-204ENST00000546898 ZNF687Q8N1G0 1237 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 LMO3Q8TAP4 145 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 SH3RF2Q8TEC5 729 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 OSCP1Q8WVF1 389 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
DDX54-204ENST00000546898 DUSP16Q9BY84 665 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 HPS4Q9NQG7 708 aa16.8■□□□□ 0.28
DDX54-204ENST00000546898 NDRG2Q9UN36 371 aaKnown RBP16.8■□□□□ 0.28
DDX54-204ENST00000546898 HHLA1C9JL84 531 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 IFNAR2P48551 515 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms