RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 ACSS2Q9NR19 701 aa7.84□□□□□ -1.15
CHPT1-203ENST00000546873 FEM1BQ9UK73 627 aa7.84□□□□□ -1.15
CHPT1-203ENST00000546873 PCDHA1Q9Y5I3 950 aa7.84□□□□□ -1.15
CHPT1-203ENST00000546873 ABCB11O95342 1321 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 BAZ2BQ9UIF8 2168 aaKnown RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 GOLGA6L6A8MZA4 724 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 PLA2G6O60733 806 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 PTMAP06454 111 aaKnown RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 FNTBP49356 437 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 KIF11P52732 1056 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 ALDH6A1Q02252 535 aaKnown RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 ROM1Q03395 351 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 KIF22Q14807 665 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 POSTNQ15063 836 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 CALCRLQ16602 461 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 SHROOM1Q2M3G4 852 aaPredicted RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 USH1GQ495M9 461 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 EARS2Q5JPH6 523 aaKnown RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 FAM83BQ5T0W9 1011 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 SCYL3Q8IZE3 742 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 SPICE1Q8N0Z3 855 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 IQUBQ8NA54 791 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 CHST14Q8NCH0 376 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 OR14K1Q8NGZ2 314 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 MAFAQ8NHW3 353 aaPredicted RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 TBCKQ8TEA7 893 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 SMARCE1Q969G3 411 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 CCDC47Q96A33 483 aaKnown RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 DHX58Q96C10 678 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 NUP88Q99567 741 aaPredicted RBP7.83□□□□□ -1.16
CHPT1-203ENST00000546873 PANK2Q9BZ23 570 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 ZSWIM4Q9H7M6 989 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 VWA7Q9Y334 891 aa7.83□□□□□ -1.16
CHPT1-203ENST00000546873 ALPK3Q96L96 1907 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 POLR2DO15514 142 aaKnown RBP7.82□□□□□ -1.16
CHPT1-203ENST00000546873 TLR2O60603 784 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 MAFO75444 373 aaPredicted RBP7.82□□□□□ -1.16
CHPT1-203ENST00000546873 SGPL1O95470 568 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 UBA7P41226 1012 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 STAT6P42226 847 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 STAT5BP51692 787 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 TBR1Q16650 682 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 TRIML1Q8N9V2 468 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 RAET1EQ8TD07 263 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 ACER1Q8TDN7 264 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 LPPQ93052 612 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 CALML4Q96GE6 196 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 PAWRQ96IZ0 340 aaKnown RBP7.82□□□□□ -1.16
CHPT1-203ENST00000546873 CDK5RAP3Q96JB5 506 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 SLF1Q9BQI6 1058 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 ANO3Q9BYT9 981 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 CUEDC2Q9H467 287 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 RMND1Q9NWS8 449 aa7.82□□□□□ -1.16
CHPT1-203ENST00000546873 SAE1Q9UBE0 346 aaPredicted RBP7.82□□□□□ -1.16
CHPT1-203ENST00000546873 MRPL11Q9Y3B7 192 aaKnown RBP7.82□□□□□ -1.16
CHPT1-203ENST00000546873 KDM3AQ9Y4C1 1321 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 A0A1W2PRG0 241 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 SMTNL1A8MU46 457 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 H2AFYO75367 372 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 TFRCP02786 760 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 MYL1P05976 194 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 PSMC4P43686 418 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 PRMT2P55345 433 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 RRP1BQ14684 758 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 UBE2SQ16763 222 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 SPECC1Q5M775 1068 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 MOXD1Q6UVY6 613 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 ANKRD13AQ8IZ07 590 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 PDILTQ8N807 584 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 GFM2Q969S9 779 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 CDX2Q99626 313 aaPredicted RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 BPIFA3Q9BQP9 254 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 GTPBP4Q9BZE4 634 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 RANBP17Q9H2T7 1088 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 TMEM260Q9NX78 707 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 TMOD4Q9NZQ9 345 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 DDX25Q9UHL0 483 aaKnown RBP7.81□□□□□ -1.16
CHPT1-203ENST00000546873 CPA4Q9UI42 421 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 EYSQ5T1H1 3165 aa7.81□□□□□ -1.16
CHPT1-203ENST00000546873 MYPNQ86TC9 1320 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PHIPQ8WWQ0 1821 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 BTBD19C9JJ37 291 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 GCOM1H8Y6P7 765 aaPredicted RBP7.8□□□□□ -1.16
CHPT1-203ENST00000546873 MATN2O00339 956 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 CYR61O00622 381 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 SLC26A4O43511 780 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 CYP17A1P05093 508 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 POLR2MP0CAP2 368 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 UBXN2AP68543 259 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 SLC6A3Q01959 620 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PRKCZQ05513 592 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PNOCQ13519 176 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 RRAGBQ5VZM2 374 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 HAUS3Q68CZ6 603 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 PPP4R3AQ6IN85 833 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 KLHDC10Q6PID8 442 aa7.8□□□□□ -1.16
CHPT1-203ENST00000546873 CCDC174Q6PII3 467 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms