RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 ZSWIM1Q9BR11 485 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 TTLL2Q9BWV7 592 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 LHX5Q9H2C1 402 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 ACP6Q9NPH0 428 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 IL37Q9NZH6 218 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 TRPM5Q9NZQ8 1165 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 CDH22Q9UJ99 828 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 CDH7Q9ULB5 785 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 CAPN11Q9UMQ6 739 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 PCDHGC3Q9UN70 934 aa14.53□□□□□ -0.08
PTCH1-213ENST00000546820 LUC7L2Q9Y383 392 aaKnown RBP14.53□□□□□ -0.08
PTCH1-213ENST00000546820 A0A1W2PRU2 124 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 F11P03951 625 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 DDX6P26196 483 aaKnown RBP eCLIP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 ZBED6P86452 979 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 TAF10Q12962 218 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 PRSS36Q5K4E3 855 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 GAREM2Q75VX8 874 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 GET4Q7L5D6 327 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 ADHFE1Q8IWW8 467 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 TDRD5Q8NAT2 981 aaKnown RBP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 TMEM35BQ8NCS4 154 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 STKLD1Q8NE28 680 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 ITFG1Q8TB96 612 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 FEZF2Q8TBJ5 459 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 STK32AQ8WU08 396 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 CPLX3Q8WVH0 158 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 BAP1Q92560 729 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 SECISBP2LQ93073 1101 aaKnown RBP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 ZNF334Q9HCZ1 680 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-213ENST00000546820 AIPL1Q9NZN9 384 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 SCML2Q9UQR0 700 aa14.52□□□□□ -0.09
PTCH1-213ENST00000546820 REV3LO60673 3130 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 LRRC53A6NM62 1247 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 HHLA1C9JL84 531 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 LAMP2P13473 410 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SSTR3P32745 418 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-213ENST00000546820 GPD2P43304 727 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TKTL1P51854 596 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 KIF11P52732 1056 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 USP46P62068 366 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 CDR2Q01850 454 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TEAD2Q15562 447 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 ASIC2Q16515 512 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SLC5A9Q2M3M2 681 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 DENND1BQ6P3S1 775 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SIX6OS1Q8N1H7 587 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 ARHGAP18Q8N392 663 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SHKBP1Q8TBC3 707 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 ING5Q8WYH8 240 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SYN2Q92777 582 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-213ENST00000546820 FGF13Q92913 245 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TCEAL4Q96EI5 215 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 MCRS1Q96EZ8 462 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TTYH3Q9C0H2 523 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 SLITRK6Q9H5Y7 841 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TASP1Q9H6P5 420 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 IL21Q9HBE4 155 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 CYLDQ9NQC7 956 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 TLR8Q9NR97 1041 aaKnown RBP14.51□□□□□ -0.09
PTCH1-213ENST00000546820 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-213ENST00000546820 C2orf16Q68DN1 1984 aa14.51□□□□□ -0.09
PTCH1-213ENST00000546820 FAM92AA1XBS5 289 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 FBXO21O94952 628 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 ZBED1O96006 694 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 ABL1P00519 1130 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 PFKLP17858 780 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 CCR2P41597 374 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 PSEN1P49768 467 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 ZNF75DP51815 510 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 RAB41Q5JT25 222 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 GPR158Q5T848 1215 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 TAF3Q5VWG9 929 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 PMF1Q6P1K2 205 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 TRIM72Q6ZMU5 477 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 IRF2BP2Q7Z5L9 587 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 NOP9Q86U38 636 aaKnown RBP14.5□□□□□ -0.09
PTCH1-213ENST00000546820 MON1AQ86VX9 555 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 ZDHHC14Q8IZN3 488 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 MSANTD4Q8NCY6 345 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 EPS8L1Q8TE68 723 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 MRFAP1L1Q96HT8 127 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 MIS12Q9H081 205 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 CNGB3Q9NQW8 809 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 ST7Q9NRC1 585 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 EPS15L1Q9UBC2 864 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 BZW2Q9Y6E2 419 aaKnown RBP14.5□□□□□ -0.09
PTCH1-213ENST00000546820 USP3Q9Y6I4 520 aa14.5□□□□□ -0.09
PTCH1-213ENST00000546820 NCANO14594 1321 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 ZNF840PA6NDX5 716 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 LOC730098B7Z3J9 87 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 MOSPD3O75425 235 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 SLC34A2O95436 690 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 LSM8O95777 96 aaKnown RBP14.49□□□□□ -0.09
PTCH1-213ENST00000546820 MMEP08473 750 aa14.49□□□□□ -0.09
PTCH1-213ENST00000546820 USP17L7P0C7H9 530 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms