RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	CETN3	O15182	167 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	EPB41	P11171	864 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	POU3F3	P20264	500 aa	Predicted RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CYP3A5	P20815	502 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	ACAT1	P24752	427 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	RPL13	P26373	211 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	OR1D2	P34982	312 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	PSMC2	P35998	433 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	LTBR	P36941	435 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	MYL6	P60660	151 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	DSG1	Q02413	1049 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	PPP3CA	Q08209	521 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	BMS1	Q14692	1282 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	DUSP6	Q16828	381 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CCDC142	Q17RM4	750 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CCDC40	Q4G0X9	1142 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	C1orf220	Q5T0J3	134 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	TDRD10	Q5VZ19	366 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	SPOPL	Q6IQ16	392 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	TTI2	Q6NXR4	508 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	SCARA5	Q6ZMJ2	495 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	TRAPPC11	Q7Z392	1133 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	WDR49	Q8IV35	697 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	C12orf56	Q8IXR9	622 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	RNF168	Q8IYW5	571 aa	Predicted RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	LNX1	Q8TBB1	728 aa	Predicted RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CACTIN	Q8WUQ7	758 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	DHTKD1	Q96HY7	919 aa	Predicted RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	SENP8	Q96LD8	212 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	PGLYRP2	Q96PD5	576 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CLSTN3	Q9BQT9	956 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	KIAA1586	Q9HCI6	787 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	NGRN	Q9NPE2	291 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CHST7	Q9NS84	486 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	LMCD1	Q9NZU5	365 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CGN	Q9P2M7	1197 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	POLI	Q9UNA4	740 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	R3HCC1	Q9Y3T6	440 aa	Known RBP	6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	SNX9	Q9Y5X1	595 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	CDY1	Q9Y6F8	540 aa		6.92	□□□□□ -1.3
TAF1D-222	ENST00000546088	KPNA7	A9QM74	516 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TMEM189-UBE2V1	I3L0A0	370 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TRAPPC3	O43617	180 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TIAF1	O95411	115 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	EFEMP2	O95967	443 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	MBD3	O95983	291 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	C4BPA	P04003	597 aa	Known RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	KRT13	P13646	458 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	RAP1GAP	P47736	663 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TAF6	P49848	677 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	SNRPF	P62306	86 aa	Known RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	RBP5	P82980	135 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	FKBP3	Q00688	224 aa	Known RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	YWHAH	Q04917	246 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	ORC1	Q13415	861 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TRPC3	Q13507	836 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	NFKBIB	Q15653	356 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TPD52L1	Q16890	204 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	EDRF1	Q3B7T1	1238 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	CTXN3	Q4LDR2	81 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	CCDC183	Q5T5S1	534 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	WSCD1	Q658N2	575 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	SASS6	Q6UVJ0	657 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	C11orf57	Q6ZUT1	292 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	USP37	Q86T82	979 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	ST13P5	Q8NFI4	369 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	CXorf38	Q8TB03	319 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	HPDL	Q96IR7	371 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	MMS19	Q96T76	1030 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	EMILIN2	Q9BXX0	1053 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	TMPRSS13	Q9BYE2	586 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	UBE2Z	Q9H832	354 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	DERA	Q9Y315	318 aa		6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.91	□□□□□ -1.3
TAF1D-222	ENST00000546088	SYCE3	A1L190	88 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	TGM5	O43548	720 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	RFPL2	O75678	378 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	VNN1	O95497	513 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	PDGFRB	P09619	1106 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	PIK3CA	P42336	1068 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	CLCN4	P51793	760 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	CDH8	P55286	799 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	LRRC63	Q05C16	580 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	LRMP	Q12912	555 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	ADAM15	Q13444	863 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	SURF1	Q15526	300 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	WDR72	Q3MJ13	1102 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	SV2C	Q496J9	727 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	CBWD6	Q4V339	395 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	COBLL1	Q53SF7	1204 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	CBWD3	Q5JTY5	395 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	CBWD5	Q5RIA9	395 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	RARS2	Q5T160	578 aa	Known RBP	6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	OVOS1	Q6IE37	1185 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	TMC5	Q6UXY8	1006 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	OSTM1	Q86WC4	334 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	TRIML1	Q8N9V2	468 aa		6.9	□□□□□ -1.3
TAF1D-222	ENST00000546088	C12orf50	Q8NA57	414 aa	Predicted RBP	6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms