RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ID4P47928 161 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 PDE6CP51160 858 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 SLC7A9P82251 487 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 GUF1Q8N442 669 aaKnown RBP22.45■■□□□ 1.18
SCARB1-210ENST00000545493 EZH1Q92800 747 aaPredicted RBP22.45■■□□□ 1.18
SCARB1-210ENST00000545493 ATP2A3Q93084 1043 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 CCDC47Q96A33 483 aaKnown RBP22.45■■□□□ 1.18
SCARB1-210ENST00000545493 KRT82Q9NSB4 513 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 CACNA1AO00555 2505 aa22.45■■□□□ 1.18
SCARB1-210ENST00000545493 LEFTY2O00292 366 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 ATP8B3O60423 1300 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 RNF40O75150 1001 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 CCDC130P13994 396 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 VAMP7P51809 220 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 GRSF1Q12849 480 aaKnown RBP eCLIP22.44■■□□□ 1.18
SCARB1-210ENST00000545493 SRSF5Q13243 272 aaKnown RBP22.44■■□□□ 1.18
SCARB1-210ENST00000545493 LPAL2Q16609 132 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 ACOT1Q86TX2 421 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 LONP2Q86WA8 852 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 SMYD4Q8IYR2 804 aaPredicted RBP22.44■■□□□ 1.18
SCARB1-210ENST00000545493 FUKQ8N0W3 1084 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 RMDN1Q96DB5 314 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 SMARCD1Q96GM5 515 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 TNIP3Q96KP6 325 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 KCNK16Q96T55 309 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 CEP250Q9BV73 2442 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 RNF38Q9H0F5 515 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 APOBEC3GQ9HC16 384 aaKnown RBP22.44■■□□□ 1.18
SCARB1-210ENST00000545493 DMAP1Q9NPF5 467 aaPredicted RBP22.44■■□□□ 1.18
SCARB1-210ENST00000545493 CPQQ9Y646 472 aa22.44■■□□□ 1.18
SCARB1-210ENST00000545493 TNFRSF10BO14763 440 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 IKBKBO14920 756 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 PPP3CCP48454 512 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 NDST1P52848 882 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 SLC5A3P53794 718 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 PPP3CAQ08209 521 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 SGSM1Q2NKQ1 1148 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 INTS8Q75QN2 995 aaKnown RBP22.43■■□□□ 1.18
SCARB1-210ENST00000545493 NUP93Q8N1F7 819 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 ZMIZ2Q8NF64 920 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 TAS1R2Q8TE23 839 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 TAF4BQ92750 862 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 SLITRK1Q96PX8 696 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 TWNKQ96RR1 684 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 P2RY13Q9BPV8 354 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 MED10Q9BTT4 135 aa22.43■■□□□ 1.18
SCARB1-210ENST00000545493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.43■■□□□ 1.184e-6■■■■■ 59.3
SCARB1-210ENST00000545493 P4HA1P13674 534 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 DRD1P21728 446 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 GALK1P51570 392 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 AMPD2Q01433 879 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 PNOCQ13519 176 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 GAB4Q2WGN9 574 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 HEATR6Q6AI08 1181 aaKnown RBP22.42■■□□□ 1.18
SCARB1-210ENST00000545493 FAM186BQ8IYM0 893 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 SCAMP5Q8TAC9 235 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 CD101Q93033 1021 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 LINC00597Q9H2U6 94 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 PARD6AQ9NPB6 346 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 POLR3BQ9NW08 1133 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-210ENST00000545493 SMPD4Q9NXE4 827 aa22.42■■□□□ 1.18
SCARB1-210ENST00000545493 EML5Q05BV3 1969 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 SCAMP3O14828 347 aaKnown RBP22.41■■□□□ 1.18
SCARB1-210ENST00000545493 HRO43593 1189 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 AP1G2O75843 785 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 RTN3O95197 1032 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-210ENST00000545493 NFATC1O95644 943 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 ABL1P00519 1130 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 TGM1P22735 817 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 YWHAQP27348 245 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 GCLMP48507 274 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 INCA1Q0VD86 236 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 PRR23BQ6ZRT6 265 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 FILIP1Q7Z7B0 1213 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 WDR5BQ86VZ2 330 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 SLC2A14Q8TDB8 520 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 OVCA2Q8WZ82 227 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 FBXO32Q969P5 355 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 ZFRQ96KR1 1074 aaKnown RBP22.41■■□□□ 1.18
SCARB1-210ENST00000545493 SMOQ99835 787 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 FAM49BQ9NUQ9 324 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 GMEB2Q9UKD1 530 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 ATG2BQ96BY7 2078 aa22.41■■□□□ 1.18
SCARB1-210ENST00000545493 BEST1O76090 585 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 CYP17A1P05093 508 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 HOXA6P31267 233 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 ENPEPQ07075 957 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 UNC93AQ86WB7 457 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 FMR1NBQ8N0W7 255 aaPredicted RBP22.4■■□□□ 1.18
SCARB1-210ENST00000545493 C12orf29Q8N999 325 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 PDZD8Q8NEN9 1154 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 MMRN2Q9H8L6 949 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 IL37Q9NZH6 218 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 GMIPQ9P107 970 aa22.4■■□□□ 1.18
SCARB1-210ENST00000545493 MYH10P35580 1976 aa22.39■■□□□ 1.18
SCARB1-210ENST00000545493 FAM92AA1XBS5 289 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 ZDHHC11BP0C7U3 371 aa22.39■■□□□ 1.17
SCARB1-210ENST00000545493 MBL2P11226 248 aaPredicted RBP22.39■■□□□ 1.17
SCARB1-210ENST00000545493 PSMC2P35998 433 aaKnown RBP22.39■■□□□ 1.17
SCARB1-210ENST00000545493 OPRD1P41143 372 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms