RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 EFHC1Q5JVL4 640 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 C9orf50Q5SZB4 431 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 PAPD7Q5XG87 772 aaKnown RBP14.48□□□□□ -0.09
SCARB1-209ENST00000545305 SLC8B1Q6J4K2 584 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 SCN4BQ8IWT1 228 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 SCUBE3Q8IX30 993 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 GPR65Q8IYL9 337 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 UBL4BQ8N7F7 174 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 ZMIZ2Q8NF64 920 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 PGLYRP2Q96PD5 576 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 KCNK16Q96T55 309 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 TLR10Q9BXR5 811 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCARB1-209ENST00000545305 SNX12Q9UMY4 172 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 ALG6Q9Y672 507 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 SAR1BQ9Y6B6 198 aa14.48□□□□□ -0.09
SCARB1-209ENST00000545305 LCHNA4D1U4 455 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 HSF2BPO75031 334 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 GPD1P21695 349 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 PSMA2P25787 234 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 OR1D2P34982 312 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 CA8P35219 290 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 RFC1P35251 1148 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-209ENST00000545305 BMPR1AP36894 532 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 SSR1P43307 286 aaKnown RBP14.47□□□□□ -0.09
SCARB1-209ENST00000545305 DNA2P51530 1060 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 RNASE9P60153 205 aaKnown RBP14.47□□□□□ -0.09
SCARB1-209ENST00000545305 ROR1Q01973 937 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 RNF19BQ6ZMZ0 732 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 SLC26A9Q7LBE3 791 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 KLHL23Q8NBE8 558 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 JOSD2Q8TAC2 188 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 FNIP1Q8TF40 1166 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 GOLGA1Q92805 767 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 FAM149B1Q96BN6 582 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 C8orf48Q96LL4 319 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 PLVAPQ9BX97 442 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 ULBP1Q9BZM6 244 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 UBE2OQ9C0C9 1292 aaKnown RBP14.47□□□□□ -0.09
SCARB1-209ENST00000545305 ZBP1Q9H171 429 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 TMEM30AQ9NV96 361 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 PACSIN2Q9UNF0 486 aaPredicted RBP14.47□□□□□ -0.09
SCARB1-209ENST00000545305 PATJQ8NI35 1801 aa14.47□□□□□ -0.09
SCARB1-209ENST00000545305 LINC01553A4QN01 128 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 HHLA1C9JL84 531 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 GABBR2O75899 941 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 GLI1P08151 1106 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 LINC00271P0C7V0 271 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 PRLRP16471 622 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 RPL17P18621 184 aaKnown RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 DNAJB2P25686 324 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 SDC4P31431 198 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 RABGGTBP53611 331 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 RPL10AP62906 217 aaKnown RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 MRPS5P82675 430 aaKnown RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 AMPD2Q01433 879 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 SHHQ15465 462 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 MGAT5BQ3V5L5 792 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 RAB41Q5JT25 222 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 TPGS2Q68CL5 300 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 RSPO2Q6UXX9 243 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 GPRIN1Q7Z2K8 1008 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 SCML4Q8N228 414 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 EMC1Q8N766 993 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 NIPA2Q8N8Q9 360 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 CLEC4CQ8WTT0 213 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 IRGQQ8WZA9 623 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 HES6Q96HZ4 224 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 OSBPL9Q96SU4 736 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 SEPT5Q99719 369 aaPredicted RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 CNPY3Q9BT09 278 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 TRIM62Q9BVG3 475 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 ASNSD1Q9NWL6 643 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 AFF4Q9UHB7 1163 aaKnown RBP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 CDC23Q9UJX2 597 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 TMEM59LQ9UK28 342 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 LZTS1Q9Y250 596 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 USTQ9Y2C2 406 aa14.46□□□□□ -0.09
SCARB1-209ENST00000545305 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.46□□□□□ -0.09
SCARB1-209ENST00000545305 WDR27A2RRH5 827 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 CCDC66A2RUB6 948 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 DPYSL4O14531 572 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 KCNK3O14649 394 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 DAB1O75553 588 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 GRAP2O75791 330 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 RNF8O76064 485 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 ZBED1O96006 694 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 CTSAP10619 480 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 HAPLN1P10915 354 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-209ENST00000545305 PDGFRAP16234 1089 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 CTNNA2P26232 953 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 NDUFV1P49821 464 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 ZNF143P52747 638 aaPredicted RBP14.45□□□□□ -0.1
SCARB1-209ENST00000545305 SLC5A3P53794 718 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 DAOAP59103 153 aa14.45□□□□□ -0.1
SCARB1-209ENST00000545305 OGDHQ02218 1023 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms