RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 GPD2P43304 727 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 RPL34P49207 117 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 PSEN1P49768 467 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SLC5A3P53794 718 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 PDE4CQ08493 712 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 TBX2Q13207 712 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 ASIC2Q16515 512 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 PDZD4Q76G19 769 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 GRASPQ7Z6J2 395 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 NOP9Q86U38 636 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 VPS36Q86VN1 386 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SCML4Q8N228 414 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 ZMIZ2Q8NF64 920 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 CORO1BQ9BR76 489 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 GRPEL1Q9HAV7 217 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 LRRC4Q9HBW1 653 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 NOCTQ9UK39 431 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SCML2Q9UQR0 700 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 USP15Q9Y4E8 981 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SPTBN5Q9NRC6 3674 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 MBTPS2O43462 519 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 BEST1O76090 585 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 ADCY5O95622 1261 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 SERPING1P05155 500 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 MRE11P49959 708 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 KIF11P52732 1056 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 CACNA2D1P54289 1103 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 MRPS5P82675 430 aaKnown RBP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 ARID5AQ03989 594 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 KLHL30Q0D2K2 578 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 ARHGAP15Q53QZ3 475 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 OTOP3Q7RTS5 596 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 TMC6Q7Z403 805 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 PIGZQ86VD9 579 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 SIX6OS1Q8N1H7 587 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 ARHGAP18Q8N392 663 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 UBA3Q8TBC4 463 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 CPLX3Q8WVH0 158 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 SECISBP2LQ93073 1101 aaKnown RBP12.39□□□□□ -0.43
SNHG1-221ENST00000544983 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 SLC4A5Q9BY07 1137 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 ACP6Q9NPH0 428 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 CNGB3Q9NQW8 809 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 GDE1Q9NZC3 331 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 PRKAG3Q9UGI9 489 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 NR2E1Q9Y466 385 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 USP3Q9Y6I4 520 aa12.39□□□□□ -0.43
SNHG1-221ENST00000544983 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 MFAP3LO75121 409 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 ZBED1O96006 694 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 FSHRP23945 695 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 GPR15P49685 360 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 CDR1P51861 262 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 CDK17Q00537 523 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 CLUL1Q15846 466 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 SDHAF4Q5VUM1 108 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 PM20D1Q6GTS8 502 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 PMF1Q6P1K2 205 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 TMEM110Q86TL2 294 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 ZDHHC17Q8IUH5 632 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 STKLD1Q8NE28 680 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 GPR152Q8TDT2 470 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 IRGQQ8WZA9 623 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 MRPS31Q92665 395 aaKnown RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 ANP32BQ92688 251 aaKnown RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 FBXO32Q969P5 355 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 ACSF2Q96CM8 615 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 CDK5RAP1Q96SZ6 601 aaKnown RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 AGPAT1Q99943 283 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 PHF7Q9BWX1 381 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 TLR8Q9NR97 1041 aaKnown RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
SNHG1-221ENST00000544983 MAGED2Q9UNF1 606 aaPredicted RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
SNHG1-221ENST00000544983 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 GREB1Q4ZG55 1949 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 F11P03951 625 aa12.37□□□□□ -0.43
SNHG1-221ENST00000544983 CYP1A1P04798 512 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms