RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.28
CHD4-211ENST00000544484 CHST12Q9NRB3 414 aa13.27□□□□□ -0.28
CHD4-211ENST00000544484 MYO1GB0I1T2 1018 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 F5H5T6 163 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 CAND2O75155 1236 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 JCHAINP01591 159 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 DNAL1Q4LDG9 190 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 DNERQ8NFT8 737 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 EDEM1Q92611 657 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 WNK4Q96J92 1243 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 SERPINB12Q96P63 405 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 MTO1Q9Y2Z2 717 aaKnown RBP13.27□□□□□ -0.29
CHD4-211ENST00000544484 FAM95CA0A1B0GW59 222 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 FKBP9O95302 570 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 DNAJB2P25686 324 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 CDH8P55286 799 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 KRT72Q14CN4 511 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 GRIK4Q16099 956 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 FBXO47Q5MNV8 452 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 FKBP9P1Q75LS8 142 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 DEFB128Q7Z7B8 93 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 GALNT4Q8N4A0 578 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 NCF1BA6NI72 391 aaPredicted RBP13.27□□□□□ -0.29
CHD4-211ENST00000544484 NCF1CA8MVU1 366 aaPredicted RBP13.27□□□□□ -0.29
CHD4-211ENST00000544484 TISP43B9A030 160 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 SLC2A3P11169 496 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 NCF1P14598 390 aaPredicted RBP13.27□□□□□ -0.29
CHD4-211ENST00000544484 SLC26A2P50443 739 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 C4orf22Q6V702 233 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 CNPY3Q9BT09 278 aa13.27□□□□□ -0.29
CHD4-211ENST00000544484 SLC12A8A0AV02 714 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 SUPT7LO94864 414 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 TKTL1P51854 596 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 BTKQ06187 659 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ZSWIM2Q8NEG5 633 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PPP1R2P1Q96PQ5 205 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 TMEM161AQ9NX61 479 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ADCY3O60266 1144 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SRP72O76094 671 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 KLHL2O95198 593 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 POU4F1Q01851 419 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 FLOT2Q14254 428 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 FAM83EQ2M2I3 478 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 C11orf96Q7Z7L8 435 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 AGGF1Q8N302 714 aaeCLIP13.26□□□□□ -0.294e-7■■■□□ 14.7
CHD4-211ENST00000544484 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 EME1Q96AY2 570 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 HLA-DPA1P20036 260 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 GEMP55040 296 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ANKS3Q6ZW76 656 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CARNMT1Q8N4J0 409 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 DUSP9Q99956 384 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 CDC42EP4Q9H3Q1 356 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 DOLKQ9UPQ8 538 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CDY2AQ9Y6F7 541 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 NDST1P52848 882 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PDK2Q15119 407 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CLEC4FQ8N1N0 589 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SAMD3Q8N6K7 520 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PCYOX1LQ8NBM8 494 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ZNF606Q8WXB4 792 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 KCNK16Q96T55 309 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 IARS2Q9NSE4 1012 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SLIT1O75093 1534 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 HEATR9A2RTY3 570 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SPTLC1O15269 473 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PJA2O43164 708 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 FAM107AO95990 144 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 DDX39BQ13838 428 aaKnown RBP13.26□□□□□ -0.29
CHD4-211ENST00000544484 MEI1Q5TIA1 1274 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ABRAQ8N0Z2 381 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ACTL9Q8TC94 416 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CMTM5Q96DZ9 223 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 ZNF518BQ9C0D4 1074 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 YY1AP1Q9H869 796 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
CHD4-211ENST00000544484 CCT8L1PA6NM43 557 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 TRIP10Q15642 601 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
CHD4-211ENST00000544484 CYP4F12Q9HCS2 524 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 STARD7Q9NQZ5 370 aa13.25□□□□□ -0.29
CHD4-211ENST00000544484 TSPAN16Q9UKR8 245 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms