RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
AP3B2-210ENST00000543938 METTL11BQ5VVY1 283 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 APOA5Q6Q788 366 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 DEPDC4Q8N2C3 294 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 FBXL6Q8N531 539 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 TMIGD2Q96BF3 282 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 CDK5RAP1Q96SZ6 601 aaKnown RBP13.17□□□□□ -0.3
AP3B2-210ENST00000543938 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
AP3B2-210ENST00000543938 PACSIN2Q9UNF0 486 aaPredicted RBP13.17□□□□□ -0.3
AP3B2-210ENST00000543938 SULT1B1O43704 296 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 NR4A2P43354 598 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 DRG2P55039 364 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RNF111Q6ZNA4 994 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ZNF704Q6ZNC4 412 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TRIM63Q969Q1 353 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ADAMTS6Q9UKP5 1117 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 PSMD12O00232 456 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 BET1O15155 118 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 MSI1O43347 362 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 HNF1BP35680 557 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 SRP54P61011 504 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RHAGQ02094 409 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RUNX1T1Q06455 604 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 SLC15A2Q16348 729 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ASTE1Q2TB18 679 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ATP2A3Q93084 1043 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 FAM89AQ96GI7 184 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ALPK1Q96QP1 1244 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TARS2Q9BW92 718 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 CELF4Q9BZC1 486 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 FANCFQ9NPI8 374 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 BCAP29Q9UHQ4 241 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ATP6V1HQ9UI12 483 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 NOC2LQ9Y3T9 749 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TEX51A0A1B0GUA7 166 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TM7SF2O76062 418 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 AFMP43652 599 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 CLUL1Q15846 466 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 CCNJQ5T5M9 372 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 IYDQ6PHW0 289 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TMPRSS6Q8IU80 811 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ISOC1Q96CN7 298 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RIC8BQ9NVN3 520 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
AP3B2-210ENST00000543938 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
AP3B2-210ENST00000543938 COL15A1P39059 1388 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 J3QRK9 145 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 FOXN3O00409 490 aaPredicted RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 SLC1A4P43007 532 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 BAG6P46379 1132 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 OLR1P78380 273 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 GALK2Q01415 458 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 POU6F1Q14863 301 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 TAF12Q16514 161 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 C6orf10Q5SRN2 563 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 ZDHHC24Q6UX98 284 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 ASCC1Q8N9N2 400 aaKnown RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 WASF1Q92558 559 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 TBC1D20Q96BZ9 403 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 FBXL8Q96CD0 374 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 OR2B2Q9GZK3 357 aa13.15□□□□□ -0.3
AP3B2-210ENST00000543938 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 AVENQ9NQS1 362 aaPredicted RBP13.15□□□□□ -0.3
AP3B2-210ENST00000543938 MRPL39Q9NYK5 338 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms