RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CNTN6Q9UQ52 1028 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 SH3BP1Q9Y3L3 701 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TARSL2A2RTX5 802 aaKnown RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 ASPAP45381 313 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 TPI1P60174 286 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 FAM189BP81408 668 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 CAP1Q01518 475 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 PDK1Q15118 436 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 XKR4Q5GH76 650 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 SEMA4DQ92854 862 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 KREMEN1Q96MU8 473 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 ZSWIM1Q9BR11 485 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 CALN1Q9BXU9 219 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 GPR88Q9GZN0 384 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 HSD3B7Q9H2F3 369 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 KCNF1Q9H3M0 494 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 O00370 1275 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 VNN1O95497 513 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 FTCDO95954 541 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 CYP1A1P04798 512 aaPredicted RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 NNMTP40261 264 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 RAP1GAPP47736 663 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 FMO1Q01740 532 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 HDXQ7Z353 690 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 UBA3Q8TBC4 463 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 SLC2A14Q8TDB8 520 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 USP13Q92995 863 aaPredicted RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 MYLPFQ96A32 169 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 KLC2Q9H0B6 622 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 NOL4O94818 638 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 CXCL10P02778 98 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 TGM2P21980 687 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 FNTAP49354 379 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 BCAR1P56945 870 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 MTFR1Q15390 333 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 TIGD7Q6NT04 549 aaPredicted RBP8.35□□□□□ -1.07
TRIM59-208ENST00000543469 MON1AQ86VX9 555 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 ARFGAP2Q8N6H7 521 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 HES2Q9Y543 173 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 PCDHGC5Q9Y5F6 944 aa8.35□□□□□ -1.07
TRIM59-208ENST00000543469 INPPL1O15357 1258 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 LTFP02788 710 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 RAD23BP54727 409 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 RAD51Q06609 339 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PTP4A2Q12974 167 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 SLC39A12Q504Y0 691 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 UBXN11Q5T124 520 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CCSAPQ6IQ19 270 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 DARS2Q6PI48 645 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ARHGEF18Q6ZSZ5 1173 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 WHAMMQ8TF30 809 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 TEKT4Q8WW24 435 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 THG1LQ9NWX6 298 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ALG6Q9Y672 507 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 KIAA1217Q5T5P2 1943 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 FGF10O15520 208 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 GLUD1P00367 558 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CCR1P32246 355 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CDH5P33151 784 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 NR2C2P49116 596 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 MCCD1P59942 119 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 P3H1Q32P28 736 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PAPD7Q5XG87 772 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 REXO1L1PQ8IX06 675 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CDCA3Q99618 268 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 THAP2Q9H0W7 228 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PPCSQ9HAB8 311 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CYP4F11Q9HBI6 524 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 TXNDC16Q9P2K2 825 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 LZTS1Q9Y250 596 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PARP14Q460N5 1801 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PABPN1LA6NDY0 278 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 SOD2P04179 222 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 NCAM1P13591 858 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ACO1P21399 889 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 PLA2G4AP47712 749 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 RGS7P49802 495 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ZNF143P52747 638 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CDH6P55285 790 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 MAP3K7CLP57077 242 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 CCDC15Q0P6D6 951 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 GLIPR1L2Q4G1C9 344 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 DENND5BQ6ZUT9 1274 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ARCQ7LC44 396 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 ACTRT1Q8TDG2 376 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 HDAC7Q8WUI4 952 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 IRX2Q9BZI1 471 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 HACD1B0YJ81 288 aa8.34□□□□□ -1.07
TRIM59-208ENST00000543469 EEF2KO00418 725 aaKnown RBP8.34□□□□□ -1.07
TRIM59-208ENST00000543469 AP5Z1O43299 807 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms