RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TAF11Q15544 211 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ZRANB3Q5FWF4 1079 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 FIBCD1Q8N539 461 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CEP70Q8NHQ1 597 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SYN2Q92777 582 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PDGFDQ9GZP0 370 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 NMRK2Q9NPI5 230 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 MRPL17Q9NRX2 175 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 INTS13Q9NVM9 706 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ALG6Q9Y672 507 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ATP1A1P05023 1023 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP3A4P08684 503 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SMIM10L2AP0DMW4 78 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SMIM10L2BP0DMW5 78 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ACAT1P24752 427 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 HMOX2P30519 316 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 NCAPHQ15003 741 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ALFQ53S48 1182 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 COBLL1Q53SF7 1204 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RBM20Q5T481 1227 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ANKMY2Q8IV38 441 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 DDIASQ8IXT1 998 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 BTBD6Q96KE9 485 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 UBXN6Q9BZV1 441 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SMPD4Q9NXE4 827 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 BARX2Q9UMQ3 279 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 TMEM150BA6NC51 233 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 BTBD19C9JJ37 291 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RECQL4O94761 1208 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ELNP15502 786 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 MRPS6P82932 125 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PREPLQ4J6C6 727 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 C4orf22Q6V702 233 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SLFN11Q7Z7L1 901 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 NUDCD3Q8IVD9 361 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ELOVL4Q9GZR5 314 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 TRIM33Q9UPN9 1127 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 L3MBTL1Q9Y468 752 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RIC1Q4ADV7 1423 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CYTH3O43739 400 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 NAT2P11245 290 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 BRAFP15056 766 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PON1P27169 355 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 IFT88Q13099 833 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 LINC00523Q86TU6 105 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM131BQ86XD5 332 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SPATA4Q8NEY3 305 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CSGALNACT1Q8TDX6 532 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC26A7Q8TE54 656 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SMARCD1Q96GM5 515 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SPATA16Q9BXB7 569 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 DMAP1Q9NPF5 467 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 GGT7Q9UJ14 662 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SNX12Q9UMY4 172 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 VPS9D1Q9Y2B5 631 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CAPN7Q9Y6W3 813 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 UBR1Q8IWV7 1749 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 FRMPD4Q14CM0 1322 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PHF2O75151 1096 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 POLBP06746 335 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PNMA6AP0CW24 399 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP11B1P15538 503 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 YWHAQP27348 245 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RHOAP61586 193 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 DGKZQ13574 1117 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 USP10Q14694 798 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 C4orf46Q504U0 113 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 TREML2Q5T2D2 321 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 SPRYD7Q5W111 196 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM172AQ8WUF8 416 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 TFB1MQ8WVM0 346 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 KLHL29Q96CT2 875 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 XPO6Q96QU8 1125 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RBM15Q96T37 977 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 AGXT2Q9BYV1 514 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 XPO7Q9UIA9 1087 aaKnown RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 C2orf81A6NN90 581 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 RNASEH2AO75792 299 aaKnown RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 AKAP3O75969 853 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 ENDOD1O94919 500 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CHRM3P20309 590 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 ATXN3P54252 364 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC9A5Q14940 896 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF284Q2VY69 593 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 TIGD7Q6NT04 549 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC149Q6ZUS6 474 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 C14orf80Q86SX3 495 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 BRSK2Q8IWQ3 736 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CD99L2Q8TCZ2 262 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 TEKT4Q8WW24 435 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 C20orf96Q9NUD7 363 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 NSMCE4AQ9NXX6 385 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC195A0A1B0GUA6 201 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 PRMT3O60678 531 aa7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 RTN3O95197 1032 aaPredicted RBP7.15□□□□□ -1.26
SRGAP1-206ENST00000543397 CCR1P32246 355 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms