RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 C12orf29Q8N999 325 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 WHAMMQ8TF30 809 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SEMA4DQ92854 862 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TNIP3Q96KP6 325 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SMOQ99835 787 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LINC00597Q9H2U6 94 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FBRSL1Q9HCM7 1045 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TMEM8AQ9HCN3 771 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZSCAN32Q9NX65 697 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PCDHGA2Q9Y5H1 932 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ATG2BQ96BY7 2078 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GADD45BO75293 160 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 BEST1O76090 585 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 OAS1P00973 400 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZDHHC11BP0C7U3 371 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 P4HA1P13674 534 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CCDC130P13994 396 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GTF2H1P32780 548 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PIK3CAP42336 1068 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PGFP49763 221 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SATB1Q01826 763 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PDGFRLQ15198 375 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TMEM196Q5HYL7 178 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 DGKKQ5KSL6 1271 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SNX30Q5VWJ9 437 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ANKRD40Q6AI12 368 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FSTL4Q6MZW2 842 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZC3H14Q6PJT7 736 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SPEM1Q8N4L4 309 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SH3RF2Q8TEC5 729 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CCDC34Q96HJ3 373 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CYP3A43Q9HB55 503 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LAMA1P25391 3075 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 K7ESF4 209 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LEFTY2O00292 366 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CETN3O15182 167 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CILPO75339 1184 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KRT13P13646 458 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 BMP6P22004 513 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 YWHAQP27348 245 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HOXC13P31276 330 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GJA4P35212 333 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LRRC32Q14392 662 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GAB4Q2WGN9 574 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KRT39Q6A163 491 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SYNPOQ8N3V7 929 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SLC2A14Q8TDB8 520 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 EZH1Q92800 747 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SMARCD1Q96GM5 515 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HNRNPABQ99729 332 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FAM126AQ9BYI3 521 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 DUS2Q9NX74 493 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CHORDC1Q9UHD1 332 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 WNT6Q9Y6F9 365 aa13.91□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 AP1G2O75843 785 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SMC2O95347 1197 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CXCL12P48061 93 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PDE6CP51160 858 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GALK1P51570 392 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CCR3P51677 355 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SLC5A3P53794 718 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CC2D1AQ6P1N0 951 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PKN3Q6P5Z2 889 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KIAA1958Q8N8K9 716 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SLITRK1Q96PX8 696 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 MED10Q9BTT4 135 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KRT82Q9NSB4 513 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 MAN1B1Q9UKM7 699 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 MYH10P35580 1976 aa13.9□□□□□ -0.18
TNFRSF1A-215ENST00000543359 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 TRIM49BA6NDI0 452 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 SLC16A3O15427 465 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 KINO60870 393 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 EPB41P11171 864 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-215ENST00000543359 DMWDQ09019 674 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms