RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 CLIC2O15247 247 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 CUTAO60888 179 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 YEATS4O95619 227 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 OLFM2O95897 454 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 ATICP31939 592 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 DGKEP52429 567 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 TNNC1P63316 161 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 CYP24A1Q07973 514 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 EHHADHQ08426 723 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 USP39Q53GS9 565 aaKnown RBP12.63□□□□□ -0.39
PTPN6-219ENST00000542848 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
PTPN6-219ENST00000542848 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 TSTD1Q8NFU3 115 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 SLITRK1Q96PX8 696 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
PTPN6-219ENST00000542848 ELOVL4Q9GZR5 314 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 MAGEF1Q9HAY2 307 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
PTPN6-219ENST00000542848 NME7Q9Y5B8 376 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
PTPN6-219ENST00000542848 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
PTPN6-219ENST00000542848 A8MXQ7 604 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 DCLK1O15075 740 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 OAS1P00973 400 aaKnown RBP12.62□□□□□ -0.39
PTPN6-219ENST00000542848 CYP2J2P51589 502 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 MRPS21P82921 87 aaKnown RBP12.62□□□□□ -0.39
PTPN6-219ENST00000542848 CREB5Q02930 508 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 TAF10Q12962 218 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 TRPC3Q13507 836 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 DHCR24Q15392 516 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 GAB4Q2WGN9 574 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 C2orf27AQ580R0 203 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 RASSF3Q86WH2 238 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPN6-219ENST00000542848 C12orf56Q8IXR9 622 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 PDZD8Q8NEN9 1154 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 OVCA2Q8WZ82 227 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 SYAP1Q96A49 352 aaPredicted RBP12.62□□□□□ -0.39
PTPN6-219ENST00000542848 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 MMP17Q9ULZ9 603 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 CPQQ9Y646 472 aa12.62□□□□□ -0.39
PTPN6-219ENST00000542848 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 POLR2DO15514 142 aaKnown RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 RTN3O95197 1032 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CAVIN2O95810 425 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 ABL1P00519 1130 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CYP17A1P05093 508 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 YWHAQP27348 245 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 AP3M2P53677 418 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 SEC13P55735 322 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 MYL6P60660 151 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CRY1Q16526 586 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 KNOP1Q1ED39 458 aaKnown RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 N4BP2L1Q5TBK1 243 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 RNF43Q68DV7 783 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CNOT6LQ96LI5 555 aaKnown RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 PNKPQ96T60 521 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 GZF1Q9H116 711 aaPredicted RBP12.61□□□□□ -0.39
PTPN6-219ENST00000542848 XYLT2Q9H1B5 865 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 DPEP3Q9H4B8 488 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 SMOC1Q9H4F8 434 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 VRTNQ9H8Y1 702 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 TBC1D14Q9P2M4 693 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 ANGPTL2Q9UKU9 493 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
PTPN6-219ENST00000542848 E2F8A0AVK6 867 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 PHACTR2O75167 634 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 KRT37O76014 449 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 KCNK5O95279 499 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 ADH1CP00326 375 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 APODP05090 189 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 MBL2P11226 248 aaPredicted RBP12.6□□□□□ -0.39
PTPN6-219ENST00000542848 KCNA4P22459 653 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 PMLP29590 882 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 GBP1P32455 592 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 SLC6A11P48066 632 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 SHC2P98077 582 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 ST3GAL2Q16842 350 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 SNX30Q5VWJ9 437 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 PMS2CLQ68D20 193 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
PTPN6-219ENST00000542848 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms